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The map label for this gene is hss [H]

Identifier: 163844277

GI number: 163844277

Start: 76610

End: 78055

Strand: Reverse

Name: hss [H]

Synonym: BSUIS_B0083

Alternate gene names: 163844277

Gene position: 78055-76610 (Counterclockwise)

Preceding gene: 163844278

Following gene: 163844276

Centisome position: 5.57

GC content: 58.3

Gene sequence:

>1446_bases
ATGGCGAGAGAAAAATGGCAGGTCTATGGCGAGATAACCGGCCCCATCATCATGATCGGCTTCGGGTCGATCGGGCGCGG
TACCCTGCCGCTGATTGAACGCCATTTCAAATTCGACCAGTCGCAAATGGTCGTGATCGACCCCAGCGAGAAAAACCGCA
AGATCCTTGATGAAAAGAATATCCGCTTCATCAAACAGGCAATCACCAGGGACAATTACAAGGATGTCCTCGGGCCGCTG
CTGAAAGGCGTGAAAGGCCAGCCCTTTGTCGTCAATCTTTCCGTCGATACAAGCTCGCTCGACCTGATGCGCTTTGTCCG
CGAATGCGGCGCGCTCTATATCGACACCGTGGTCGAACCGTGGCTCGGCTTCTACTTCGATGCGCAGGCGGACAATGCCG
CGCGGACCAATTATGCACTGCGCGAAACAGTGCGCAGCGAAAAGCGCAAGAACCCCGGCGGCCCGACCGCCGTTTCCTGC
TGCGGCGCCAATCCCGGCATGGTGTCGTGGTTCGTCAAGAAAGCGCTGGTCGATCTTGCCGCGGAACTGAAGCTCGATTT
CACCGAACCAGCGCCGCAAGACCGACACGGCTGGGCAAAGCTGATGAAAAAGGCGGGCGTGAAGGGTATCCATATCGCGG
AGCGTGATACGCAGCGCGCCAGGAAACCCAAGCCCTTCAATACCTTCTGGAATACATGGTCCGTGGAAGGCTTCATCGCG
GAAGGCCTTCAGCCTGCCGAGCTTGGCTGGGGCAGCCATGAAAAATGGAAGCCCAAGAACGCCCGCAAGCAGAAAAAGGG
CAACAAGGCCGCCATTTTCCTTGAACAACCCGGCGGCAATACGCGCATCCGTACATGGTGCCCGACGCTTGGCGCGCAAT
ATGGCCTGCTTGTGACGCATAATGAGGCGATTTCCATCGCGGATTTCTTCACCCTGCGTGACAAGAAAGGCAAGCTCGAC
TTCCGCCTCACCTGCCACTATGCCTACCACCCCTGCAACGACGCCATTGTCTCGCTTGACGAAATGTTCGGTGCGGGCGG
AAAGGCCCAGCCCGTACAGCATGTCCTCGAAGAAAACGAAATTCTGGACGGTGCGGACGAGCTTGGCGTCCTGCTCTATG
GCCACGCCAGAAACGCCTATTGGTACGGCTCGCAACTGACCGTGCAGGAAGCGCGCAAGCTTGCGCCCTACCAGAACGCA
ACCGGCTTGCAGGTTTCTTCCGCTGTGCTCGCCGGCATGGTCTGGGCGCTGGAAAACCCGCAAAGCGGCATCGTCGAGAC
CGACGAAATGGATTACCGCCGCTGCCTTGAGGTGCAGGTGCAATATCTCGGACCTGTAAAGGGCTATTATACCGACTGGA
CGCCGCTTGAGGGCCGCGACGGGCTCTTCGAGGAAGACGTCGACAGGAAAGATCCCTGGCAGTTCCGCAACGTTCTGGTC
CGCTGA

Upstream 100 bases:

>100_bases
CATGTTTCAAGTCATAGGCTTGTGACATTTCTTCCTTTCAATGAAGTTGTGCTATCGTTCCGGCACAATGAGCGAACCCG
CTCCAGCGAAGAGGAAGAAA

Downstream 100 bases:

>100_bases
TCGAGATGCCGCCCGCGTCCTGAAACGGGCGGCTTTCATTGCGACAGTTTCGCAACAGTTTCATTATCCTCACACTAAGG
ACTTGTTTTCGGGTAAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: HSS [H]

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MAREKWQVYGEITGPIIMIGFGSIGRGTLPLIERHFKFDQSQMVVIDPSEKNRKILDEKNIRFIKQAITRDNYKDVLGPL
LKGVKGQPFVVNLSVDTSSLDLMRFVRECGALYIDTVVEPWLGFYFDAQADNAARTNYALRETVRSEKRKNPGGPTAVSC
CGANPGMVSWFVKKALVDLAAELKLDFTEPAPQDRHGWAKLMKKAGVKGIHIAERDTQRARKPKPFNTFWNTWSVEGFIA
EGLQPAELGWGSHEKWKPKNARKQKKGNKAAIFLEQPGGNTRIRTWCPTLGAQYGLLVTHNEAISIADFFTLRDKKGKLD
FRLTCHYAYHPCNDAIVSLDEMFGAGGKAQPVQHVLEENEILDGADELGVLLYGHARNAYWYGSQLTVQEARKLAPYQNA
TGLQVSSAVLAGMVWALENPQSGIVETDEMDYRRCLEVQVQYLGPVKGYYTDWTPLEGRDGLFEEDVDRKDPWQFRNVLV
R

Sequences:

>Translated_481_residues
MAREKWQVYGEITGPIIMIGFGSIGRGTLPLIERHFKFDQSQMVVIDPSEKNRKILDEKNIRFIKQAITRDNYKDVLGPL
LKGVKGQPFVVNLSVDTSSLDLMRFVRECGALYIDTVVEPWLGFYFDAQADNAARTNYALRETVRSEKRKNPGGPTAVSC
CGANPGMVSWFVKKALVDLAAELKLDFTEPAPQDRHGWAKLMKKAGVKGIHIAERDTQRARKPKPFNTFWNTWSVEGFIA
EGLQPAELGWGSHEKWKPKNARKQKKGNKAAIFLEQPGGNTRIRTWCPTLGAQYGLLVTHNEAISIADFFTLRDKKGKLD
FRLTCHYAYHPCNDAIVSLDEMFGAGGKAQPVQHVLEENEILDGADELGVLLYGHARNAYWYGSQLTVQEARKLAPYQNA
TGLQVSSAVLAGMVWALENPQSGIVETDEMDYRRCLEVQVQYLGPVKGYYTDWTPLEGRDGLFEEDVDRKDPWQFRNVLV
R
>Mature_480_residues
AREKWQVYGEITGPIIMIGFGSIGRGTLPLIERHFKFDQSQMVVIDPSEKNRKILDEKNIRFIKQAITRDNYKDVLGPLL
KGVKGQPFVVNLSVDTSSLDLMRFVRECGALYIDTVVEPWLGFYFDAQADNAARTNYALRETVRSEKRKNPGGPTAVSCC
GANPGMVSWFVKKALVDLAAELKLDFTEPAPQDRHGWAKLMKKAGVKGIHIAERDTQRARKPKPFNTFWNTWSVEGFIAE
GLQPAELGWGSHEKWKPKNARKQKKGNKAAIFLEQPGGNTRIRTWCPTLGAQYGLLVTHNEAISIADFFTLRDKKGKLDF
RLTCHYAYHPCNDAIVSLDEMFGAGGKAQPVQHVLEENEILDGADELGVLLYGHARNAYWYGSQLTVQEARKLAPYQNAT
GLQVSSAVLAGMVWALENPQSGIVETDEMDYRRCLEVQVQYLGPVKGYYTDWTPLEGRDGLFEEDVDRKDPWQFRNVLVR

Specific function: Involved in the NAD(+)-dependent synthesis of the polyamine homospermidine from putrescine [H]

COG id: COG5310

COG function: function code Q; Homospermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023181
- InterPro:   IPR016040
- InterPro:   IPR005097 [H]

Pfam domain/function: PF03435 Saccharop_dh [H]

EC number: =2.5.1.44 [H]

Molecular weight: Translated: 54262; Mature: 54130

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAREKWQVYGEITGPIIMIGFGSIGRGTLPLIERHFKFDQSQMVVIDPSEKNRKILDEKN
CCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHCCCH
IRFIKQAITRDNYKDVLGPLLKGVKGQPFVVNLSVDTSSLDLMRFVRECGALYIDTVVEP
HHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEHHHHHHH
WLGFYFDAQADNAARTNYALRETVRSEKRKNPGGPTAVSCCGANPGMVSWFVKKALVDLA
HHCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
AELKLDFTEPAPQDRHGWAKLMKKAGVKGIHIAERDTQRARKPKPFNTFWNTWSVEGFIA
HHHEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCHHCCCEEECHHHH
EGLQPAELGWGSHEKWKPKNARKQKKGNKAAIFLEQPGGNTRIRTWCPTLGAQYGLLVTH
CCCCHHHCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEC
NEAISIADFFTLRDKKGKLDFRLTCHYAYHPCNDAIVSLDEMFGAGGKAQPVQHVLEENE
CCEEEEEHHEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
ILDGADELGVLLYGHARNAYWYGSQLTVQEARKLAPYQNATGLQVSSAVLAGMVWALENP
CCCCCCCCCEEEEECCCCCEEECCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCC
QSGIVETDEMDYRRCLEVQVQYLGPVKGYYTDWTPLEGRDGLFEEDVDRKDPWQFRNVLV
CCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
R
C
>Mature Secondary Structure 
AREKWQVYGEITGPIIMIGFGSIGRGTLPLIERHFKFDQSQMVVIDPSEKNRKILDEKN
CCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHCCCH
IRFIKQAITRDNYKDVLGPLLKGVKGQPFVVNLSVDTSSLDLMRFVRECGALYIDTVVEP
HHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEHHHHHHH
WLGFYFDAQADNAARTNYALRETVRSEKRKNPGGPTAVSCCGANPGMVSWFVKKALVDLA
HHCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
AELKLDFTEPAPQDRHGWAKLMKKAGVKGIHIAERDTQRARKPKPFNTFWNTWSVEGFIA
HHHEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCHHCCCEEECHHHH
EGLQPAELGWGSHEKWKPKNARKQKKGNKAAIFLEQPGGNTRIRTWCPTLGAQYGLLVTH
CCCCHHHCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEC
NEAISIADFFTLRDKKGKLDFRLTCHYAYHPCNDAIVSLDEMFGAGGKAQPVQHVLEENE
CCEEEEEHHEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
ILDGADELGVLLYGHARNAYWYGSQLTVQEARKLAPYQNATGLQVSSAVLAGMVWALENP
CCCCCCCCCEEEEECCCCCEEECCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCC
QSGIVETDEMDYRRCLEVQVQYLGPVKGYYTDWTPLEGRDGLFEEDVDRKDPWQFRNVLV
CCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]