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The map label for this gene is ygiW [C]

Identifier: 16273596

GI number: 16273596

Start: 1782470

End: 1782835

Strand: Reverse

Name: ygiW [C]

Synonym: HI1709

Alternate gene names: 16273596

Gene position: 1782835-1782470 (Counterclockwise)

Preceding gene: 16273597

Following gene: 16273595

Centisome position: 97.42

GC content: 35.52

Gene sequence:

>366_bases
ATGAAAAAATTTGCATTAGCAACAATCTTCGCATTAGCAACCACTTCAGCATTTGCTGGTTTTAATGGCAATAATAGTCA
AGGTGGTTTTCAACAAGCAGCCCCTGCTGCAATTAGTGTAAAACAAGCTTTATCTGCGGCTGATAATTCAATGATTACTT
TAGTGGGGAATATCACTCAGCAAATTGATGACGATGAGTTTTGGTTTACTGATGGGACTGGGCAAATCAAGATTGAAATT
AAAAAACGCGTTTGGAATGGTTTAAACGTAGATTCTAAGGATAAAGTGAAAATTTATGGAAAATTGGATAATGAGGTATT
TGAGAAAGCGGAGCTTGATGTATTACGTATCGAAAAAGCAGAATAA

Upstream 100 bases:

>100_bases
AAAAGTATAGTCCTCTTAATCTTTTATTAAGATTTATTTGTTTTAATACACACATCCAAGCAATGGAGCTTGAAATTAAC
TAACTTAAAAAGGAAACGTT

Downstream 100 bases:

>100_bases
TCATTTCTGAAAATGCGAGCATTAGCTCGCTGTTTTTGTTTATAAAGTGCGGTCAATTTTTTATGAGAATTTTATTGATA
GAAGACGATAATCTAATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKKFALATIFALATTSAFAGFNGNNSQGGFQQAAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEI
KKRVWNGLNVDSKDKVKIYGKLDNEVFEKAELDVLRIEKAE

Sequences:

>Translated_121_residues
MKKFALATIFALATTSAFAGFNGNNSQGGFQQAAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEI
KKRVWNGLNVDSKDKVKIYGKLDNEVFEKAELDVLRIEKAE
>Mature_121_residues
MKKFALATIFALATTSAFAGFNGNNSQGGFQQAAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEI
KKRVWNGLNVDSKDKVKIYGKLDNEVFEKAELDVLRIEKAE

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiW

Homologues:

Organism=Escherichia coli, GI1789401, Length=129, Percent_Identity=38.7596899224806, Blast_Score=79, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1709_HAEIN (P44293)

Other databases:

- EMBL:   L42023
- PIR:   F64040
- RefSeq:   NP_439851.1
- ProteinModelPortal:   P44293
- SMR:   P44293
- GeneID:   950526
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1709
- NMPDR:   fig|71421.1.peg.1622
- TIGR:   HI_1709
- HOGENOM:   HBG671169
- OMA:   EVEIDHK
- ProtClustDB:   CLSK892423
- BioCyc:   HINF71421:HI_1709-MONOMER
- InterPro:   IPR016052
- InterPro:   IPR005220
- Gene3D:   G3DSA:2.40.50.200
- TIGRFAMs:   TIGR00156

Pfam domain/function: PF04076 BOF; SSF101756 DUF388

EC number: NA

Molecular weight: Translated: 13231; Mature: 13231

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFALATIFALATTSAFAGFNGNNSQGGFQQAAPAAISVKQALSAADNSMITLVGNITQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHH
QIDDDEFWFTDGTGQIKIEIKKRVWNGLNVDSKDKVKIYGKLDNEVFEKAELDVLRIEKA
HCCCCCEEEECCCCEEEEEEEEHHCCCCCCCCCCCEEEEEECCHHHHHHHCCEEEEEEEC
E
C
>Mature Secondary Structure
MKKFALATIFALATTSAFAGFNGNNSQGGFQQAAPAAISVKQALSAADNSMITLVGNITQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHH
QIDDDEFWFTDGTGQIKIEIKKRVWNGLNVDSKDKVKIYGKLDNEVFEKAELDVLRIEKA
HCCCCCEEEECCCCEEEEEEEEHHCCCCCCCCCCCEEEEEECCHHHHHHHCCEEEEEEEC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023