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The map label for this gene is ytfE [C]

Identifier: 16273564

GI number: 16273564

Start: 1745682

End: 1746353

Strand: Direct

Name: ytfE [C]

Synonym: HI1677

Alternate gene names: 16273564

Gene position: 1745682-1746353 (Clockwise)

Preceding gene: 16273559

Following gene: 16273565

Centisome position: 95.39

GC content: 35.42

Gene sequence:

>672_bases
ATGTCTTTTGCCCAACAAAAACTTAGCGAACTCGCTGTTTCAATTCCAGGTGCAACTAAAATTTTTCGTGAATATGATTT
AGATTTTTGCTGCGGAGGTTCTGTATTATTAGAAGTCGCAGCACAACAAAAGAATCTTAACCTTGCTGAAATTGAAAAAC
GTTTAACTGATTTACAACAAAGTAAAGCAGAAAATAATGATAAAGATTGGACTTCGGCATCTTATGCGGAGATGATCGAT
CACATTATTACTCGTTTTCATAATCGCCACCGTGAACAACTCCCTGAATTAATTACATTGGCGGAGAAAGTAGAAAATAT
ACATGGTGATCGTGATGACTGTCCTATAGGCGTAGTCGCACAGTTAGAAAAAATTTATGCTGAACTTAGCCAGCATTTAA
TGAAAGAAGAACAAATTTTGTTCCCAATGATCAAAATGGGGAATTATGCTATGGCCTCAATGCCAATTCGTGTAATGGAA
ATGGAACACGATGAAGCAGGACAAGATGTGGAAGTGATCAAATCGCTTACTAATAACTGCACGCCACCAGCAGATGCTTG
TTTCAGTTGGAAAGCCTTATATAGCGGTATTAATGAATTTATTGATGATTTAATGCATCATATTCATTTGGAAAATAATA
TTTTATTTCCACGTGTATTAAACGAAAAATAA

Upstream 100 bases:

>100_bases
AATTTAATCAATAAATAAATTTCTCTACTTTTCATAATCAGAAAAATATCCTACTATTTTTATCGGATTTATTTTTACTT
AATCAATATAGGAGTGATTT

Downstream 100 bases:

>100_bases
TTTAATATTCGTCAAAAAATAACCGCACTTTAATCTATTCCGAAAAACAAACTAAAGTGCGGTCATTTTTACAAGCGTTT
TGAGTTGGTCGATAAGCCGA

Product: iron-sulfur cluster repair di-iron protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQSKAENNDKDWTSASYAEMID
HIITRFHNRHREQLPELITLAEKVENIHGDRDDCPIGVVAQLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVME
MEHDEAGQDVEVIKSLTNNCTPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK

Sequences:

>Translated_223_residues
MSFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQSKAENNDKDWTSASYAEMID
HIITRFHNRHREQLPELITLAEKVENIHGDRDDCPIGVVAQLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVME
MEHDEAGQDVEVIKSLTNNCTPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK
>Mature_222_residues
SFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQSKAENNDKDWTSASYAEMIDH
IITRFHNRHREQLPELITLAEKVENIHGDRDDCPIGVVAQLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVMEM
EHDEAGQDVEVIKSLTNNCTPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK

Specific function: Unknown

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfE

Homologues:

Organism=Escherichia coli, GI1790654, Length=220, Percent_Identity=57.7272727272727, Blast_Score=263, Evalue=8e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1677_HAEIN (P45312)

Other databases:

- EMBL:   L42023
- PIR:   F64174
- RefSeq:   NP_439819.1
- ProteinModelPortal:   P45312
- GeneID:   950862
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1677
- NMPDR:   fig|71421.1.peg.1590
- TIGR:   HI_1677
- HOGENOM:   HBG308681
- OMA:   GNPINAM
- ProtClustDB:   PRK10992
- BioCyc:   HINF71421:HI_1677-MONOMER
- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312
- TIGRFAMs:   TIGR03652

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N

EC number: NA

Molecular weight: Translated: 25489; Mature: 25358

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQ
CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SKAENNDKDWTSASYAEMIDHIITRFHNRHREQLPELITLAEKVENIHGDRDDCPIGVVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
QLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVMEMEHDEAGQDVEVIKSLTNNC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEECCCCCCCCHHHHHHHHHCCC
TPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCC
>Mature Secondary Structure 
SFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQ
CHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SKAENNDKDWTSASYAEMIDHIITRFHNRHREQLPELITLAEKVENIHGDRDDCPIGVVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
QLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVMEMEHDEAGQDVEVIKSLTNNC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEECCCCCCCCHHHHHHHHHCCC
TPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800