Click here to switch to the map view.

The map label for this gene is yebS [C]

Identifier: 16273558

GI number: 16273558

Start: 1739016

End: 1740266

Strand: Direct

Name: yebS [C]

Synonym: HI1671

Alternate gene names: 16273558

Gene position: 1739016-1740266 (Clockwise)

Preceding gene: 16273547

Following gene: 16273559

Centisome position: 95.02

GC content: 34.53

Gene sequence:

>1251_bases
GTGCCTAAAACAAAGCTAACTTCGCCTCCATTTAAAATTTTAAAATGCACAGAATGTGATGCTTGCATTAACGTGCCTTC
TATTCTTCAATCAAATGAACAAGCCGAATGCCCACGTTGTCATCATCTATTAGCAAGTGGTACGAGGTGGTCATTACATC
GTTGTGCAATGATTGCATTATCTATTTTGATATTAATGCCCTTTTCCTTGAACTACCCCTTATTAAGTTTACATTTATTG
GGTATTAAAATTGATGCCTCTATTTGGGATGGCATTTGGAAAATGGCAGTAGGTGGTTATGAATACACAGCGTTTATGAT
CTTTATTTGTGCAGTAGTAATGCCGATTACGTTTGCACTTTTAGTGATTATGCTTTGGCTGGCTAAGATTTTTCAGATAA
AACCTCGTAGTGTTTTACTATTTCTTGGTTACATTAAAGCTTGGGTAATGTTTGATGTTTATTTAGTGGCACTCGGAGTA
ACCATATTTAAAGTACGCGAATATGCAACATTAGAAATTAATATTTATTTAATTCCTTTTATTTTTACCGCACTTTTAAC
TACGCTGCTTTTTATCAAACTTAATCTTTCCGCCTTATGGCAGGAATTTTATCCTGAATGCACTTCAGTTTATACAAAAC
AAGCTGTTGAATTATGTCCTGCTTGCCATTACACATTCACGCAAAAATCTATCCATTACGATCATCAACAAAAAATTTGT
TGTCCCCGCTGCCAATCGCCTCTTAATACATCGGATAAGCTAAAATTACAAGCAACTTGGGCAACCTTAATTGCAGGGAT
TATTATGCTTTTTCCTGCAAATTTATTACCTATATCTGGCATTTATTTAACAGGCGCATTATCTGAAGATACTTTAATTT
CTGGGGTTATTTCATTTGTTAAATCAGGTAGTTATTTTGTTGCTTTTGTTGTATTTTTTGCCAGTATTTTCGTGCCTATC
AGCAAAATTTTTATTATGCTTTACTTACTTGCTTGCGTGCATTTTAAATGGCAACATTCTATTAAATGGCAAATGCGTTT
ATTGCATCTAGTACATTTTGTTGGACGCTGGTCTATGCTTGATTTATTTGTATTAGCCTTAATGATGTCGCTTGTCACAC
GCGGAGAAATCATTAATTTTACCGTAGGGCCAGGCGCATTTTATTTTGGTGCAGCCGTATTTTGCACTATGCTTTCCACC
TCACAATTTGATAGCAAATTAATTTGGAAAATTTATGACAGAGAAAAATAA

Upstream 100 bases:

>100_bases
GCTGAATAAATTTCACACAAAAATAACGCCAAGACTTCACAAATACGTTAAAACAACGATAGAATGGCACGTTTTTGATT
TATAAAGAAAGACCACAAGC

Downstream 100 bases:

>100_bases
TTCCTCCTCAATAGAAGAAAAATATCAAGAAAGAACAGCGAACTTACGTAAAACAAAACGCATTTCGCCTTTTTGGCTAT
TGCCTTTTATCGCATTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPKTKLTSPPFKILKCTECDACINVPSILQSNEQAECPRCHHLLASGTRWSLHRCAMIALSILILMPFSLNYPLLSLHLL
GIKIDASIWDGIWKMAVGGYEYTAFMIFICAVVMPITFALLVIMLWLAKIFQIKPRSVLLFLGYIKAWVMFDVYLVALGV
TIFKVREYATLEINIYLIPFIFTALLTTLLFIKLNLSALWQEFYPECTSVYTKQAVELCPACHYTFTQKSIHYDHQQKIC
CPRCQSPLNTSDKLKLQATWATLIAGIIMLFPANLLPISGIYLTGALSEDTLISGVISFVKSGSYFVAFVVFFASIFVPI
SKIFIMLYLLACVHFKWQHSIKWQMRLLHLVHFVGRWSMLDLFVLALMMSLVTRGEIINFTVGPGAFYFGAAVFCTMLST
SQFDSKLIWKIYDREK

Sequences:

>Translated_416_residues
MPKTKLTSPPFKILKCTECDACINVPSILQSNEQAECPRCHHLLASGTRWSLHRCAMIALSILILMPFSLNYPLLSLHLL
GIKIDASIWDGIWKMAVGGYEYTAFMIFICAVVMPITFALLVIMLWLAKIFQIKPRSVLLFLGYIKAWVMFDVYLVALGV
TIFKVREYATLEINIYLIPFIFTALLTTLLFIKLNLSALWQEFYPECTSVYTKQAVELCPACHYTFTQKSIHYDHQQKIC
CPRCQSPLNTSDKLKLQATWATLIAGIIMLFPANLLPISGIYLTGALSEDTLISGVISFVKSGSYFVAFVVFFASIFVPI
SKIFIMLYLLACVHFKWQHSIKWQMRLLHLVHFVGRWSMLDLFVLALMMSLVTRGEIINFTVGPGAFYFGAAVFCTMLST
SQFDSKLIWKIYDREK
>Mature_415_residues
PKTKLTSPPFKILKCTECDACINVPSILQSNEQAECPRCHHLLASGTRWSLHRCAMIALSILILMPFSLNYPLLSLHLLG
IKIDASIWDGIWKMAVGGYEYTAFMIFICAVVMPITFALLVIMLWLAKIFQIKPRSVLLFLGYIKAWVMFDVYLVALGVT
IFKVREYATLEINIYLIPFIFTALLTTLLFIKLNLSALWQEFYPECTSVYTKQAVELCPACHYTFTQKSIHYDHQQKICC
PRCQSPLNTSDKLKLQATWATLIAGIIMLFPANLLPISGIYLTGALSEDTLISGVISFVKSGSYFVAFVVFFASIFVPIS
KIFIMLYLLACVHFKWQHSIKWQMRLLHLVHFVGRWSMLDLFVLALMMSLVTRGEIINFTVGPGAFYFGAAVFCTMLSTS
QFDSKLIWKIYDREK

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family

Homologues:

Organism=Escherichia coli, GI1788137, Length=405, Percent_Identity=41.7283950617284, Blast_Score=339, Evalue=2e-94,
Organism=Escherichia coli, GI1787183, Length=418, Percent_Identity=26.7942583732057, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1671_HAEIN (P44287)

Other databases:

- EMBL:   L42023
- PIR:   I64039
- RefSeq:   NP_439813.1
- GeneID:   950860
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1671
- NMPDR:   fig|71421.1.peg.1584
- TIGR:   HI_1671
- HOGENOM:   HBG303313
- OMA:   MMSLVTR
- ProtClustDB:   CLSK2459761
- BioCyc:   HINF71421:HI_1671-MONOMER
- InterPro:   IPR005219
- InterPro:   IPR007498
- TIGRFAMs:   TIGR00155

Pfam domain/function: PF04403 PqiA

EC number: NA

Molecular weight: Translated: 47374; Mature: 47243

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00093 N4_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe9159dc)-; HASH(0xd58e044)-; HASH(0xeb22adc)-; HASH(0xd314f30)-; HASH(0xed6cf40)-; HASH(0xea1f3b0)-; HASH(0xef3366c)-; HASH(0xea0993c)-;

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTKLTSPPFKILKCTECDACINVPSILQSNEQAECPRCHHLLASGTRWSLHRCAMIAL
CCCCCCCCCCHHEEEECCCHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
SILILMPFSLNYPLLSLHLLGIKIDASIWDGIWKMAVGGYEYTAFMIFICAVVMPITFAL
HHHHHHCCCCCCCHHEEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LVIMLWLAKIFQIKPRSVLLFLGYIKAWVMFDVYLVALGVTIFKVREYATLEINIYLIPF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEHHH
IFTALLTTLLFIKLNLSALWQEFYPECTSVYTKQAVELCPACHYTFTQKSIHYDHQQKIC
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCCHHHHHHHCCCCCCCCC
CPRCQSPLNTSDKLKLQATWATLIAGIIMLFPANLLPISGIYLTGALSEDTLISGVISFV
CHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHH
KSGSYFVAFVVFFASIFVPISKIFIMLYLLACVHFKWQHSIKWQMRLLHLVHFVGRWSML
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLFVLALMMSLVTRGEIINFTVGPGAFYFGAAVFCTMLSTSQFDSKLIWKIYDREK
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH
>Mature Secondary Structure 
PKTKLTSPPFKILKCTECDACINVPSILQSNEQAECPRCHHLLASGTRWSLHRCAMIAL
CCCCCCCCCHHEEEECCCHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
SILILMPFSLNYPLLSLHLLGIKIDASIWDGIWKMAVGGYEYTAFMIFICAVVMPITFAL
HHHHHHCCCCCCCHHEEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LVIMLWLAKIFQIKPRSVLLFLGYIKAWVMFDVYLVALGVTIFKVREYATLEINIYLIPF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEHHH
IFTALLTTLLFIKLNLSALWQEFYPECTSVYTKQAVELCPACHYTFTQKSIHYDHQQKIC
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCCHHHHHHHCCCCCCCCC
CPRCQSPLNTSDKLKLQATWATLIAGIIMLFPANLLPISGIYLTGALSEDTLISGVISFV
CHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHH
KSGSYFVAFVVFFASIFVPISKIFIMLYLLACVHFKWQHSIKWQMRLLHLVHFVGRWSML
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLFVLALMMSLVTRGEIINFTVGPGAFYFGAAVFCTMLSTSQFDSKLIWKIYDREK
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800