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The map label for this gene is ygiF [C]

Identifier: 16273488

GI number: 16273488

Start: 1665333

End: 1666391

Strand: Reverse

Name: ygiF [C]

Synonym: HI1598

Alternate gene names: 16273488

Gene position: 1666391-1665333 (Counterclockwise)

Preceding gene: 30995459

Following gene: 30995458

Centisome position: 91.05

GC content: 33.43

Gene sequence:

>1059_bases
ATGGAGAATATTATGTTACAAGAAATTGAATTAAAATTGGCGATTTCGCCACAAATAGGTATTGAATTGCCACAATATCT
TGCAAAATTTACGATTTTAGAACATCAAAATTTATTTTTGGGTAACACCTATTATGATTATCCCGATCATTTTCTTGCTA
AACAAAAAATGGGGTTGCGTATTCGTCAAGAAGATCAAGAACTTACATTAACACTTAAAACTAACGGTAAAGTTGTTAGT
GGATTGCATAGTCGCCCAGAATATAATTTACCATTAATCGAAAAAGAAACGCCAACTAATGCCCAATTAAGAGGGCTTTA
TCCTTTTGAACAATTACCTAGCTCTACACTACAACCTATTTTCTCCACAGATTTTAACCGCACTTTTTGGTTAGTTGAAT
TTCAACAATCTAAAATTGAAGTGGCTTTCGATCAAGGCAAAATTATTGCAGGCGAATATGAGCAACCTATCAGTGAAATT
GAGTTTGAATTGAAATCTGGCAATGTGCAGGATCTTTTTGATTTTGTGGAAACTTTGCCTTTCGAAAGAGATATTTATTT
TAGTAGTGCAAGTAAAGCGAAGCGTGGTTATTTGCTGGGCTCAAAACAATTTTTAACAGATTGGCTCAATAAATGGCGTG
ATTTCTTAAAAGAAGAACGAGAAGAAAGTGCGGTAGATTTTTGTGCAAAATTTAATGCGGTGCTTAAAATGGAACAGAAA
CTTTTGGAAGAAACCTTATCATTTTCTCCCACACTTTTTAGCCAAGATTTTATGAAAACAGTGGAGCGAGTCGGGGCATT
TTTTAATCTTTATCATTATTATGATGAAAATGGGAAAATCTTAGAAGCGATGGCAACAGAAAAACAAAAAGAAACGCGCT
TACCAGCTTTGTTAGAAAGCAATCAGAAAATCTTTGTTGAAATTCGTGATTTGATTCGTTTTCATAGTGAAACGAAAGAC
AATGAAAAAACTATTGAAAAATTGACCGCACTTTTGAAAAGTCGAGTTTATTTTGAGCGAATGATCAAATTAATGGAATT
ATCTTATGACCTAGGGTAG

Upstream 100 bases:

>100_bases
TAAATAAAAATTCATTTATAGCTATTTAATATGTAAAGTAAAACACCACAAAAATCTTGATTTATTTCTATTGTATTGTA
TATTTAACCAGTTAATTTAA

Downstream 100 bases:

>100_bases
GTATACCCTAGGCTGATCTCAGTGCTACTCCGTTGGGGTAGTTTGATGTTCCCCAAAGGGGAACCACTATAACTATAATT
AACCGTGGGTATACTTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MENIMLQEIELKLAISPQIGIELPQYLAKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQEDQELTLTLKTNGKVVS
GLHSRPEYNLPLIEKETPTNAQLRGLYPFEQLPSSTLQPIFSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEYEQPISEI
EFELKSGNVQDLFDFVETLPFERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCAKFNAVLKMEQK
LLEETLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAMATEKQKETRLPALLESNQKIFVEIRDLIRFHSETKD
NEKTIEKLTALLKSRVYFERMIKLMELSYDLG

Sequences:

>Translated_352_residues
MENIMLQEIELKLAISPQIGIELPQYLAKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQEDQELTLTLKTNGKVVS
GLHSRPEYNLPLIEKETPTNAQLRGLYPFEQLPSSTLQPIFSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEYEQPISEI
EFELKSGNVQDLFDFVETLPFERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCAKFNAVLKMEQK
LLEETLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAMATEKQKETRLPALLESNQKIFVEIRDLIRFHSETKD
NEKTIEKLTALLKSRVYFERMIKLMELSYDLG
>Mature_352_residues
MENIMLQEIELKLAISPQIGIELPQYLAKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLRIRQEDQELTLTLKTNGKVVS
GLHSRPEYNLPLIEKETPTNAQLRGLYPFEQLPSSTLQPIFSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEYEQPISEI
EFELKSGNVQDLFDFVETLPFERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCAKFNAVLKMEQK
LLEETLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAMATEKQKETRLPALLESNQKIFVEIRDLIRFHSETKD
NEKTIEKLTALLKSRVYFERMIKLMELSYDLG

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiF

Homologues:

Organism=Escherichia coli, GI1789434, Length=200, Percent_Identity=42, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1598_HAEIN (P45267)

Other databases:

- EMBL:   L42023
- PIR:   H64172
- RefSeq:   NP_439740.1
- ProteinModelPortal:   P45267
- GeneID:   950454
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1598
- NMPDR:   fig|71421.1.peg.1514
- TIGR:   HI_1598
- HOGENOM:   HBG297024
- OMA:   GAFFNLY
- ProtClustDB:   CLSK870026
- BioCyc:   HINF71421:HI_1598-MONOMER
- InterPro:   IPR008172
- InterPro:   IPR004206

Pfam domain/function: PF01928 CYTH; SSF55154 mRNA_capping_enz_bsu

EC number: NA

Molecular weight: Translated: 41316; Mature: 41316

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIMLQEIELKLAISPQIGIELPQYLAKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLR
CCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCE
IRQEDQELTLTLKTNGKVVSGLHSRPEYNLPLIEKETPTNAQLRGLYPFEQLPSSTLQPI
EEECCCEEEEEEECCCCEEECCCCCCCCCCCEEECCCCCCCEEEECCCHHHCCHHHHCHH
FSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEYEQPISEIEFELKSGNVQDLFDFVETLP
HCCCCCCEEEEEEEECCCEEEEECCCCEEECCHHCCHHHHEEECCCCCHHHHHHHHHHCC
FERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCAKFNAVLKMEQK
CCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEETLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAMATEKQKETRLPALLES
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCHHHHC
NQKIFVEIRDLIRFHSETKDNEKTIEKLTALLKSRVYFERMIKLMELSYDLG
CCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENIMLQEIELKLAISPQIGIELPQYLAKFTILEHQNLFLGNTYYDYPDHFLAKQKMGLR
CCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCE
IRQEDQELTLTLKTNGKVVSGLHSRPEYNLPLIEKETPTNAQLRGLYPFEQLPSSTLQPI
EEECCCEEEEEEECCCCEEECCCCCCCCCCCEEECCCCCCCEEEECCCHHHCCHHHHCHH
FSTDFNRTFWLVEFQQSKIEVAFDQGKIIAGEYEQPISEIEFELKSGNVQDLFDFVETLP
HCCCCCCEEEEEEEECCCEEEEECCCCEEECCHHCCHHHHEEECCCCCHHHHHHHHHHCC
FERDIYFSSASKAKRGYLLGSKQFLTDWLNKWRDFLKEEREESAVDFCAKFNAVLKMEQK
CCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEETLSFSPTLFSQDFMKTVERVGAFFNLYHYYDENGKILEAMATEKQKETRLPALLES
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCHHHHC
NQKIFVEIRDLIRFHSETKDNEKTIEKLTALLKSRVYFERMIKLMELSYDLG
CCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800