| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16273425
Identifier: 16273425
GI number: 16273425
Start: 1594829
End: 1595566
Strand: Reverse
Name: 16273425
Synonym: HI1525
Alternate gene names: NA
Gene position: 1595566-1594829 (Counterclockwise)
Preceding gene: 16273426
Following gene: 16273384
Centisome position: 87.18
GC content: 34.69
Gene sequence:
>738_bases ATGAAAAAATTAGTTGCTGTAACTTCAATGATTTTAACTACATTTTCTGTACAAGCTGCAGACTTGTATTTATATGCTGG GGCGGGACTGAAGGAGCCTGTGGAAAAAATTATTCACCAATATGAACAAGAAACAGGAAATAAAGTAACTGTTGAATATG GTGGTTCTGGACAGATTCTAGCTCGTTATAACACGGTAAAAAGTGGTGATCTTTTTTTAGCGGGTTCAGAGGATTATGTC ACAAAATTACAGAAAACTAATGATGTAAACAATATAGGGACCATAGTATTGCATGTTCCAGTTATGGCTATTCGTAAAGA TAAAATTTCAGGGATTGATTCTTTTAAAGCATTAGCTGAAAGCTCATTACGTTTAGGTATTGGTGATAGTAAAGCAATGG CTCTTGGTAAAGGCGCTGAAAAAATGTTTGAGTTGTCAGGATATCAAAAGCAACTTAATGATAAAATTGTTGTGAAAGCT GCGACGGTAAAACAATTAATGCTATATTTATTAAATGGTGATGTAGATGCAGCTGTAGTAGGTCGTTCAGGTGCTTGGAA AGTTCGAGACAAGGTTGAATTATTACCAAGTCCAAAAGGCACACCAGAAGAAAAAGTTACTATTGGTCTACTTTTTTCTT CTAAATATCCAAAAGAAGCTCAACAGTTATTTGATTTCTTTAAATCTCCTCAAGGCGTGAAGTATTTTACTGATGAAGGT TTCTTACCGGCTAAATAA
Upstream 100 bases:
>100_bases TTAATTTATAAACTAAAGATTGAATAAATCTTTCGAATAATTCATTATACAATTTTATATATATCGATTTTCGCTGAAAC TCATTTTATAAGGAGAGAAA
Downstream 100 bases:
>100_bases TTGTCTAAGTTTAAAGTTAGCGCTGATCCCATTATTAATACTATTATTTGTTGTTATGGGATCGGTGCTTTCTTTAATCG CAAAATTAGATTTTTATTTT
Product: molybdate-binding periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKLVAVTSMILTTFSVQAADLYLYAGAGLKEPVEKIIHQYEQETGNKVTVEYGGSGQILARYNTVKSGDLFLAGSEDYV TKLQKTNDVNNIGTIVLHVPVMAIRKDKISGIDSFKALAESSLRLGIGDSKAMALGKGAEKMFELSGYQKQLNDKIVVKA ATVKQLMLYLLNGDVDAAVVGRSGAWKVRDKVELLPSPKGTPEEKVTIGLLFSSKYPKEAQQLFDFFKSPQGVKYFTDEG FLPAK
Sequences:
>Translated_245_residues MKKLVAVTSMILTTFSVQAADLYLYAGAGLKEPVEKIIHQYEQETGNKVTVEYGGSGQILARYNTVKSGDLFLAGSEDYV TKLQKTNDVNNIGTIVLHVPVMAIRKDKISGIDSFKALAESSLRLGIGDSKAMALGKGAEKMFELSGYQKQLNDKIVVKA ATVKQLMLYLLNGDVDAAVVGRSGAWKVRDKVELLPSPKGTPEEKVTIGLLFSSKYPKEAQQLFDFFKSPQGVKYFTDEG FLPAK >Mature_245_residues MKKLVAVTSMILTTFSVQAADLYLYAGAGLKEPVEKIIHQYEQETGNKVTVEYGGSGQILARYNTVKSGDLFLAGSEDYV TKLQKTNDVNNIGTIVLHVPVMAIRKDKISGIDSFKALAESSLRLGIGDSKAMALGKGAEKMFELSGYQKQLNDKIVVKA ATVKQLMLYLLNGDVDAAVVGRSGAWKVRDKVELLPSPKGTPEEKVTIGLLFSSKYPKEAQQLFDFFKSPQGVKYFTDEG FLPAK
Specific function: Probably involved in the binding-dependent system
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein modA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1525_HAEIN (P71391)
Other databases:
- EMBL: L42023 - PIR: B64127 - RefSeq: NP_439674.1 - ProteinModelPortal: P71391 - GeneID: 950823 - GenomeReviews: L42023_GR - KEGG: hin:HI1525 - NMPDR: fig|71421.1.peg.1452 - TIGR: HI_1525 - HOGENOM: HBG636769 - OMA: YVGAGMQ - ProtClustDB: CLSK215358 - BioCyc: HINF71421:HI_1525-MONOMER - InterPro: IPR005950 - InterPro: IPR006059 - TIGRFAMs: TIGR01256
Pfam domain/function: PF01547 SBP_bac_1
EC number: NA
Molecular weight: Translated: 26765; Mature: 26765
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVAVTSMILTTFSVQAADLYLYAGAGLKEPVEKIIHQYEQETGNKVTVEYGGSGQIL CCHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEE ARYNTVKSGDLFLAGSEDYVTKLQKTNDVNNIGTIVLHVPVMAIRKDKISGIDSFKALAE EEEECCCCCCEEEECCHHHHHHHHHCCCCCHHEEEEEEHHHHHHHHHHHCCHHHHHHHHH SSLRLGIGDSKAMALGKGAEKMFELSGYQKQLNDKIVVKAATVKQLMLYLLNGDVDAAVV CCEEECCCCCHHHHHCCCHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEE GRSGAWKVRDKVELLPSPKGTPEEKVTIGLLFSSKYPKEAQQLFDFFKSPQGVKYFTDEG CCCCCEEECCHHEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCC FLPAK CCCCC >Mature Secondary Structure MKKLVAVTSMILTTFSVQAADLYLYAGAGLKEPVEKIIHQYEQETGNKVTVEYGGSGQIL CCHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEE ARYNTVKSGDLFLAGSEDYVTKLQKTNDVNNIGTIVLHVPVMAIRKDKISGIDSFKALAE EEEECCCCCCEEEECCHHHHHHHHHCCCCCHHEEEEEEHHHHHHHHHHHCCHHHHHHHHH SSLRLGIGDSKAMALGKGAEKMFELSGYQKQLNDKIVVKAATVKQLMLYLLNGDVDAAVV CCEEECCCCCHHHHHCCCHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEE GRSGAWKVRDKVELLPSPKGTPEEKVTIGLLFSSKYPKEAQQLFDFFKSPQGVKYFTDEG CCCCCEEECCHHEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCC FLPAK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023