| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16273400
Identifier: 16273400
GI number: 16273400
Start: 1571635
End: 1571943
Strand: Direct
Name: 16273400
Synonym: HI1498.1
Alternate gene names: NA
Gene position: 1571635-1571943 (Clockwise)
Preceding gene: 16273399
Following gene: 16273401
Centisome position: 85.88
GC content: 45.31
Gene sequence:
>309_bases ATGTCGTTTAAAGAATTGATTACTCAAGACCAACGCCTTGTGGTATTACGCGTACTTTCCGAAGCCGGCTATGATGCCAA CGAGTCGATTATTAATGATGGCTTGGATTTATACGGTCACGATATTAGCCGCGATTTAGTCCGTACCCATTTGAGCTGGT TAGAAGAGCAAGGCTTACTCACTATTGAACGCCTAAAAGATGGCTATATGGTGGCAAGTATTACCCAACGGTGGCTTAGA TGTAGCACAAGGTCGTGTGGCAGTGGAAGGCGTAAAACGCCCCCGCCCGAAAATTTAAACACCGTTTAA
Upstream 100 bases:
>100_bases ACCGATGTGAAAGGCGACACCAAAGCCACTTCACGCCAAGTAGATGCAATGAGTCACCAAGTGGGCTTGTTATTAGAAGC AAAATTAAAGGAATGATGAA
Downstream 100 bases:
>100_bases AGGAGGTTTAAATGAATGACAAAACCACCCGAGGGCGTGCCAGCAAGGTTGATTTATTGCCGCCAAACATCAAATCCACC CTCACGATGATGTTGCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSFKELITQDQRLVVLRVLSEAGYDANESIINDGLDLYGHDISRDLVRTHLSWLEEQGLLTIERLKDGYMVASITQRWLR CSTRSCGSGRRKTPPPENLNTV
Sequences:
>Translated_102_residues MSFKELITQDQRLVVLRVLSEAGYDANESIINDGLDLYGHDISRDLVRTHLSWLEEQGLLTIERLKDGYMVASITQRWLR CSTRSCGSGRRKTPPPENLNTV >Mature_101_residues SFKELITQDQRLVVLRVLSEAGYDANESIINDGLDLYGHDISRDLVRTHLSWLEEQGLLTIERLKDGYMVASITQRWLRC STRSCGSGRRKTPPPENLNTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y149A_HAEIN (O86242)
Other databases:
- EMBL: L42023 - RefSeq: NP_439648.1 - GeneID: 950365 - GenomeReviews: L42023_GR - KEGG: hin:HI1498.1 - NMPDR: fig|71421.1.peg.1427 - TIGR: HI_1498.1 - HOGENOM: HBG661114 - OMA: ASITQRW - BioCyc: HINF71421:HI_1498.1-MONOMER - InterPro: IPR013668
Pfam domain/function: PF08461 HTH_12
EC number: NA
Molecular weight: Translated: 11648; Mature: 11517
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKELITQDQRLVVLRVLSEAGYDANESIINDGLDLYGHDISRDLVRTHLSWLEEQGLL CCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCE TIERLKDGYMVASITQRWLRCSTRSCGSGRRKTPPPENLNTV EHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFKELITQDQRLVVLRVLSEAGYDANESIINDGLDLYGHDISRDLVRTHLSWLEEQGLL CHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCE TIERLKDGYMVASITQRWLRCSTRSCGSGRRKTPPPENLNTV EHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800