Click here to switch to the map view.

The map label for this gene is 16273326

Identifier: 16273326

GI number: 16273326

Start: 1510258

End: 1510551

Strand: Direct

Name: 16273326

Synonym: HI1420

Alternate gene names: NA

Gene position: 1510258-1510551 (Clockwise)

Preceding gene: 16273325

Following gene: 16273327

Centisome position: 82.52

GC content: 39.46

Gene sequence:

>294_bases
ATGACTGAACAATTAAAAGACTTTGATGTGGCAGAACACCTCACTTCTGAAGAAGAAATTCAACTTTACCTTAATGAAAT
TCTACAAGAAGATAATATTGAGCTTATTTTATCCGCCCTTGGCGACATAGCCCGTGCGCGTAACATGAGCCAAATCGCAC
GTGATGCAGGAATAAGCCGAGAAGGTCTTTATAAAGCCTTATCTGGCACGGGCAATCCTACTTTTGCTACTGTAATGAAA
GTAATGAAAGCCTTAAATTTACAATTCCAAGTGCAACAATCTCGATTCGCCTAA

Upstream 100 bases:

>100_bases
ACCAGAATGGCGTATTAGTGATTTTACTTTGTGGCGGAGATAAATCCACACAAGATAAAGATATTAAACAAGCAAAACTT
CTCGCACAGGAGCTAGGATT

Downstream 100 bases:

>100_bases
AAGAAATGCGGTCAAAATCGACCGCACTTTTCAGGCAATAAATAAATATTGCTTGCCTTCTGTTGATAATAGCAATAAAA
GTGATGTTTTTACCGTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTEQLKDFDVAEHLTSEEEIQLYLNEILQEDNIELILSALGDIARARNMSQIARDAGISREGLYKALSGTGNPTFATVMK
VMKALNLQFQVQQSRFA

Sequences:

>Translated_97_residues
MTEQLKDFDVAEHLTSEEEIQLYLNEILQEDNIELILSALGDIARARNMSQIARDAGISREGLYKALSGTGNPTFATVMK
VMKALNLQFQVQQSRFA
>Mature_96_residues
TEQLKDFDVAEHLTSEEEIQLYLNEILQEDNIELILSALGDIARARNMSQIARDAGISREGLYKALSGTGNPTFATVMKV
MKALNLQFQVQQSRFA

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1420_HAEIN (P44191)

Other databases:

- EMBL:   L42023
- PIR:   C64029
- RefSeq:   NP_439570.1
- GeneID:   950760
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1420
- TIGR:   HI_1420
- HOGENOM:   HBG665602
- OMA:   KGNPTFS
- ProtClustDB:   CLSK215936
- BioCyc:   HINF71421:HI_1420-MONOMER
- InterPro:   IPR014057
- InterPro:   IPR001387
- TIGRFAMs:   TIGR02684

Pfam domain/function: PF01381 HTH_3

EC number: NA

Molecular weight: Translated: 10890; Mature: 10758

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQLKDFDVAEHLTSEEEIQLYLNEILQEDNIELILSALGDIARARNMSQIARDAGISR
CCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EGLYKALSGTGNPTFATVMKVMKALNLQFQVQQSRFA
HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure 
TEQLKDFDVAEHLTSEEEIQLYLNEILQEDNIELILSALGDIARARNMSQIARDAGISR
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EGLYKALSGTGNPTFATVMKVMKALNLQFQVQQSRFA
HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800