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The map label for this gene is 16273323

Identifier: 16273323

GI number: 16273323

Start: 1508241

End: 1508597

Strand: Reverse

Name: 16273323

Synonym: HI1416

Alternate gene names: NA

Gene position: 1508597-1508241 (Counterclockwise)

Preceding gene: 30995448

Following gene: 16273322

Centisome position: 82.43

GC content: 36.69

Gene sequence:

>357_bases
ATGCCAATTAAAGAGCCTGATGTGTGGGCGTTAATATGGTCTTGGTTGCAAACAAATCTTAGTTCTAGCTCAGCACAGAG
TGCTTTTTGGGCGTTATTTATTTCTCTTTTAAGATTTGGGTTTATGCGTAAAAAGCCAGCTATTCGTTATGTTTTAATTG
ATGCGGCTATGTGTGCCTCTATTGCGGGTGTTGCGGTGCCAATTTGTACGCATTTATTTGGGCATACAGAATATTCTTCA
TTTCTCGGTACGATGATTGGTTTTGTTGGTACTGAAAAAATTCGCGAGTTTTTATTTAAATTCATTAATCGGAGAATTGA
AAAAGATGACAATGATGATTTCCGAAGTGACATTTAA

Upstream 100 bases:

>100_bases
GCGGTTTTAGCGCATAGCAAACGCAAGAAAGAATTTTACAGCCCTGATCGGAAACGGTCGGGGCTTTTTTATTGCCTAAA
GAACAGGCGGGAGAAAATAT

Downstream 100 bases:

>100_bases
TAAAATTTTTCCACACGCAGTTAAAGGTGTTTATCAAGCTATTTCGGCGCAGATAGAAAAAGCAGGTTGTGTGAATAAGA
TGCAGCAAGCGATGTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSS
FLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI

Sequences:

>Translated_118_residues
MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSS
FLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI
>Mature_117_residues
PIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSF
LGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1416_HAEIN (P44188)

Other databases:

- EMBL:   L42023
- PIR:   I64028
- RefSeq:   NP_439567.1
- GeneID:   950758
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1416
- TIGR:   HI_1416
- HOGENOM:   HBG095795
- OMA:   LDGSICG
- ProtClustDB:   CLSK808522
- BioCyc:   HINF71421:HI_1416-MONOMER
- InterPro:   IPR006481
- TIGRFAMs:   TIGR01594

Pfam domain/function: PF05106 Phage_holin_3

EC number: NA

Molecular weight: Translated: 13516; Mature: 13385

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCAS
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCAS
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800