| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is yhxB [C]
Identifier: 16273312
GI number: 16273312
Start: 1499076
End: 1499624
Strand: Reverse
Name: yhxB [C]
Synonym: HI1403
Alternate gene names: 16273312
Gene position: 1499624-1499076 (Counterclockwise)
Preceding gene: 16273313
Following gene: 30995447
Centisome position: 81.94
GC content: 42.08
Gene sequence:
>549_bases ATGAAAGCATTTTTGCATCATCTGCAAAACGAGGCGAAGTTGATAATTTCCCTGACTTATTGCGTGGATGGGGAATTTGC CTTAAATGAAATTGCACGGGCAACGTTACAACAATATGGGATCGTGCAACTAAGCTCAGCCACTAACAGCGACAGCGAAA CCGAAGCTGCAACATCAAAAGCCGTGAAAACCGCCTATGACAAAGCAGTAGAAGCCAAAACTACCGCAGATGGAAAGGTT GGTTTAAATGGTAACGAAAGCATTAATGGCGAGAAAACCTTTGAAAATCGTATTGTGGCAAAAAGAAATATCCGTATTTC AGACAGCCCGCATTATGCTTCACGCGGAGACTATTTAAATATCGGGGCAAACAATGGCGATTGTTGGTTCGAATATAAAT TAAGCAACCAAGAGATTGGCACACTTCGTATGCACGCTAACGGCGATTTAACCTACAAACGCCAAAAAATCTACCTAAAA ATGGATTGCTGGCAGGCTATCCACAAACGGAAATTGAAAGTTTTTACCGCCAAGAGAAAGAAGCGTTAG
Upstream 100 bases:
>100_bases TCGCAATCAATCATTTAGATATATTGCCACGCCAAGCAGGTGTGCAATATCTTTTCAACTTAACATAAGAGGTCATATAT GGCATTAGTAAATACGCCAG
Downstream 100 bases:
>100_bases CGTGGCAGGCGGATAATTCAACAGAAACCTCAATGCTCACACAAATTGCCCGAAATCGTGGTGTGCCGTTTGAAATATTG GTAGAAAAAGTGATTGAAAA
Product: tail fiber protein/phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKAFLHHLQNEAKLIISLTYCVDGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTADGKV GLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLNIGANNGDCWFEYKLSNQEIGTLRMHANGDLTYKRQKIYLK MDCWQAIHKRKLKVFTAKRKKR
Sequences:
>Translated_182_residues MKAFLHHLQNEAKLIISLTYCVDGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTADGKV GLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLNIGANNGDCWFEYKLSNQEIGTLRMHANGDLTYKRQKIYLK MDCWQAIHKRKLKVFTAKRKKR >Mature_182_residues MKAFLHHLQNEAKLIISLTYCVDGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTADGKV GLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLNIGANNGDCWFEYKLSNQEIGTLRMHANGDLTYKRQKIYLK MDCWQAIHKRKLKVFTAKRKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1403_HAEIN (P44178)
Other databases:
- EMBL: L42023 - PIR: H64027 - RefSeq: NP_439556.1 - ProteinModelPortal: P44178 - SMR: P44178 - GeneID: 950856 - GenomeReviews: L42023_GR - KEGG: hin:HI1403 - NMPDR: fig|71421.1.peg.1339 - TIGR: HI_1403 - BioCyc: HINF71421:HI_1403-MONOMER - InterPro: IPR005068
Pfam domain/function: PF03406 Phage_fiber_2
EC number: NA
Molecular weight: Translated: 20537; Mature: 20537
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFLHHLQNEAKLIISLTYCVDGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSK CCHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHH AVKTAYDKAVEAKTTADGKVGLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLN HHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHCEEEECCEEECCCCCCCCCCCEEE IGANNGDCWFEYKLSNQEIGTLRMHANGDLTYKRQKIYLKMDCWQAIHKRKLKVFTAKRK ECCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEHHHHHHHHHHHHHEEECCCC KR CC >Mature Secondary Structure MKAFLHHLQNEAKLIISLTYCVDGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSK CCHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHH AVKTAYDKAVEAKTTADGKVGLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLN HHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHCEEEECCEEECCCCCCCCCCCEEE IGANNGDCWFEYKLSNQEIGTLRMHANGDLTYKRQKIYLKMDCWQAIHKRKLKVFTAKRK ECCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEHHHHHHHHHHHHHEEECCCC KR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800