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The map label for this gene is yohK [C]

Identifier: 16273211

GI number: 16273211

Start: 1376580

End: 1377275

Strand: Direct

Name: yohK [C]

Synonym: HI1298

Alternate gene names: 16273211

Gene position: 1376580-1377275 (Clockwise)

Preceding gene: 16273210

Following gene: 16273212

Centisome position: 75.22

GC content: 38.36

Gene sequence:

>696_bases
ATGCAGCAGTACATTATTTATCTTTATACATTTTTAACAATTTTTGGGTTTTGGCTCGCACTACAAATTAGCAAACGTTG
GAAGTCAATGATTTTTAATACTTTTGTTTTAACAGTATTAATTTTGGCGGCGATTTTAGTGATAGGAAAGATTCCTTATG
ATGATTATATGGCAGGAAATGCGCCTATTAATAATTTACTTGGCTTGAGTATCGTTGCTCTCGCATTGCCTCTTTATGAA
CAACTTCGCCAAATTGCCAGACAATGGAAAATTATTCTTTCAACGGTGGTTATAGCCTCTTTTTTGGCGATGTTAAGTGG
CGGGCTTTTAGCACTTCTTTTAGGCTCAACGCCCGAAATGGTCGCTACGGTTTTACCTAAATCCATCACAATGCCTATTG
CGATGGAAGTTTCTCGTCATTTAGGCGGCATTCCTGCCGTAACTGCAGTTGGTGTTGTGGTTGCAGGTTTGCAAGGATCG
ATATTTGGTTATCTTGTATTAAAAAAATTGGGTGTTAAACATCAAGAAGCTATTGGGCTTTCTGTTGGTTCGGTTTCTCA
CGCGCTCGGTACAGTAAGTTGTATGGAAACGAATCCAACAGCGGGAAGCTACAGTTCTATTTCTCTTGTGCTTTGTGGGA
TTATTAGTTCTATTCTCGCGCCATTTGTATTTAAGCTGATTTATTTCTTTGTTTAA

Upstream 100 bases:

>100_bases
TTTGTATCAGATGCAATCTTTTACACATAAACGCAAAAAAGTAATAAAACGTAGAGAAAATCAGGTAAAACAAGCGAATT
AGTATGTTAGGAAAGTTTAT

Downstream 100 bases:

>100_bases
ATATCAATAAAAATTCAACCGCACTTTATTCATTTTAGATTGCGTTTGTTATAGATAAAGTGCGGTTGTTTTTTGCGCTA
AATGATTAGATAATGCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGNAPINNLLGLSIVALALPLYE
QLRQIARQWKIILSTVVIASFLAMLSGGLLALLLGSTPEMVATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGS
IFGYLVLKKLGVKHQEAIGLSVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV

Sequences:

>Translated_231_residues
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGNAPINNLLGLSIVALALPLYE
QLRQIARQWKIILSTVVIASFLAMLSGGLLALLLGSTPEMVATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGS
IFGYLVLKKLGVKHQEAIGLSVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV
>Mature_231_residues
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGNAPINNLLGLSIVALALPLYE
QLRQIARQWKIILSTVVIASFLAMLSGGLLALLLGSTPEMVATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGS
IFGYLVLKKLGVKHQEAIGLSVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family

Homologues:

Organism=Escherichia coli, GI1788464, Length=216, Percent_Identity=43.5185185185185, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1298_HAEIN (P45146)

Other databases:

- EMBL:   L42023
- PIR:   D64170
- RefSeq:   NP_439449.1
- GeneID:   950227
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1298
- NMPDR:   fig|71421.1.peg.1237
- TIGR:   HI_1298
- HOGENOM:   HBG363009
- OMA:   PYKTYFD
- ProtClustDB:   CLSK870282
- BioCyc:   HINF71421:HI_1298-MONOMER
- InterPro:   IPR005261
- InterPro:   IPR007300
- TIGRFAMs:   TIGR00659

Pfam domain/function: PF04172 LrgB

EC number: NA

Molecular weight: Translated: 24886; Mature: 24886

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe5a9a30)-; HASH(0xe62b6a0)-; HASH(0xdec4acc)-; HASH(0xe00e25c)-; HASH(0xe0df16c)-; HASH(0xe132f2c)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
APINNLLGLSIVALALPLYEQLRQIARQWKIILSTVVIASFLAMLSGGLLALLLGSTPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH
VATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGSIFGYLVLKKLGVKHQEAIGL
HHHHCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
SVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV
HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
APINNLLGLSIVALALPLYEQLRQIARQWKIILSTVVIASFLAMLSGGLLALLLGSTPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH
VATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGSIFGYLVLKKLGVKHQEAIGL
HHHHCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
SVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV
HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800