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The map label for this gene is yrbE [C]

Identifier: 16273014

GI number: 16273014

Start: 1150841

End: 1151626

Strand: Reverse

Name: yrbE [C]

Synonym: HI1086

Alternate gene names: 16273014

Gene position: 1151626-1150841 (Counterclockwise)

Preceding gene: 16273015

Following gene: 16273013

Centisome position: 62.93

GC content: 40.59

Gene sequence:

>786_bases
ATGATCGTCAATTTTATTTCTGCTTTAGGAAAACAGGTGATCGACTTTTTCCGTGCATTAGGGCGAGCAGGCTTTATGTT
ATTTGGCGCATTGATCGGCAAGCCACAAATTCGCAAGCATTTTCCTTTGCTTGTGAAGCAAATGCATGTTTTAGGTGTCC
AATCGTTACTCATTATTTTGTTGTCCGGTTTATTTATTGGAATGGTATTAGGGCTACAAGGTTATGTCGTGTTAATCGAT
TTTTCTGCTGAAACAAGTTTGGGGCAGCTTGTAGCACTTTCTCTTTTACGAGAATTAGGCCCTGTTGTTACCGCACTTTT
ATTTGCTGGTCGAGCAGGTTCTGCATTGACAGCTGAAATAGGCTTAATGAAAGCCACTGAACAACTTTCTAGTCTTGAAA
TGATGGCGGTAGATCCTTTACGTCGAGTGATTGCACCTCGTTTTTGGGCGGGTGTCATTTCTATGCCAGTTTTATCAATC
TTGTTTATCGCAATTGGTATTTGGGGTGGTTCTTTAGTCGGTGTAGATTGGAAAGGTGTTGATTCAGGCAGTTTTTGGTC
TGTGATGCAAAATTCCGTGAGTTGGAGTTATGATATTTTAAATGGCTTTATTAAAGCGGTTTTCTTTGCTGTAGCCGTAA
CTTGGATTGCGCTGTTCAATGGTTATGATTGTATGCCAACATCAGAAGGTATCAGCCAAGCTACAACGCGAACAGTTGTG
CATGCATCGCTTGTTGTTCTAGGATTAGATTTTATTTTGACTGCTATTATGTTTGGCGCAGGTTAA

Upstream 100 bases:

>100_bases
AAAGCCAAGATCTGCGAGTGGTGCAATTCTTAAAAGGTGAATCTGATGGTCCTGTGCGCTTTAAGTACCCAGCGCAAGAT
TATGTGAAGGAATTGTTTGA

Downstream 100 bases:

>100_bases
GGATTTTTTTATGAGACAAACAATTAAATATGAATTTTGGGTTGGATTATTTTTATTACTTGGTATTGGTGCCTTAGTTT
TTTTAGGTTTACGCGTAGCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIVNFISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLID
FSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSI
LFIAIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVV
HASLVVLGLDFILTAIMFGAG

Sequences:

>Translated_261_residues
MIVNFISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLID
FSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSI
LFIAIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVV
HASLVVLGLDFILTAIMFGAG
>Mature_261_residues
MIVNFISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLID
FSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSI
LFIAIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVV
HASLVVLGLDFILTAIMFGAG

Specific function: Could be part of an ABC transporter complex

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family

Homologues:

Organism=Escherichia coli, GI1789585, Length=259, Percent_Identity=72.5868725868726, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1086_HAEIN (P45030)

Other databases:

- EMBL:   L42023
- PIR:   D64166
- RefSeq:   NP_439243.1
- GeneID:   950061
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1086
- NMPDR:   fig|71421.1.peg.1043
- TIGR:   HI_1086
- HOGENOM:   HBG564941
- OMA:   MIRVISS
- ProtClustDB:   CLSK869997
- BioCyc:   HINF71421:HI_1086-MONOMER
- GO:   GO:0006810
- InterPro:   IPR003453
- TIGRFAMs:   TIGR00056

Pfam domain/function: PF02405 DUF140

EC number: NA

Molecular weight: Translated: 28016; Mature: 28016

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xde83f40)-; HASH(0xdf6e4fc)-; HASH(0xdbdd43c)-; HASH(0xb0083f0)-; HASH(0xd72bff4)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800