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The map label for this gene is yrbC [C]

Identifier: 16273012

GI number: 16273012

Start: 1149653

End: 1150297

Strand: Reverse

Name: yrbC [C]

Synonym: HI1084

Alternate gene names: 16273012

Gene position: 1150297-1149653 (Counterclockwise)

Preceding gene: 16273013

Following gene: 16273011

Centisome position: 62.85

GC content: 31.01

Gene sequence:

>645_bases
ATGAACCTTATTCAACTAAAAAAATGGTTTACCATTTTAACTTTCGTATTAACCGCATTTTTGGTTACACGAACAGCTAT
TGCAGAAACAAGTCCTTATGTTTTAATGCAGCAAGCGGCAGATAAACTATTTTCTGATATACAAGCTAATCAAAGTAAAA
TTAAACAAGATCCAAATTATTTACGTACTATTGTTCGTAATGATTTATTGCCTTATGTAAACTTAGAATATGCAGGTTCT
AAAGTATTAGGTTCATACTACAAATCAACCTCTGCAGAACAACGCGAAAAATTTTTCAAAACTTTTGGCGAATTGATTGA
GCAAAAGTATGCACAAGCATTAACAAATTATTCTAATCAAAAAATTCAAATTGAATCAGAAAAAGAATTAGGCGATAACA
ATTTTATAAATATTCGCGTAAATATTATTCAAGCTAACGGAGTTGCCCCAATCTTGTTATATTTTAAATGGCGTAAAGGC
AATAAAAGTGGGGAATGGAAAGTTTATGATATGGTGGGAGCAGGCGTAAGTATGCTGGAAGATACGATAAAAAATTGGGT
TGGTATTTTAAACAAACAAGGTATTGATACATTAATCACAAAGATGCAGCAATCTGCCTCACAACCTATAATTTTCAATC
AATAA

Upstream 100 bases:

>100_bases
TAATTGGGCAATTCTTATATGGAAGTAAAAAATCGGACGGCAATGAAAAATCAGAATCCACAGAACAATAGGTTAAATTT
TATAAATTAGGAGATTGATA

Downstream 100 bases:

>100_bases
ATGAATAACTATGCTAAATTGGGATTTGCAAAAAAATAATGATAAAATAACGCTCTTTTTGTTTGGGGAACTATCTCGCA
GCACGTTGTTACCAATGTGG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNLIQLKKWFTILTFVLTAFLVTRTAIAETSPYVLMQQAADKLFSDIQANQSKIKQDPNYLRTIVRNDLLPYVNLEYAGS
KVLGSYYKSTSAEQREKFFKTFGELIEQKYAQALTNYSNQKIQIESEKELGDNNFINIRVNIIQANGVAPILLYFKWRKG
NKSGEWKVYDMVGAGVSMLEDTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ

Sequences:

>Translated_214_residues
MNLIQLKKWFTILTFVLTAFLVTRTAIAETSPYVLMQQAADKLFSDIQANQSKIKQDPNYLRTIVRNDLLPYVNLEYAGS
KVLGSYYKSTSAEQREKFFKTFGELIEQKYAQALTNYSNQKIQIESEKELGDNNFINIRVNIIQANGVAPILLYFKWRKG
NKSGEWKVYDMVGAGVSMLEDTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ
>Mature_214_residues
MNLIQLKKWFTILTFVLTAFLVTRTAIAETSPYVLMQQAADKLFSDIQANQSKIKQDPNYLRTIVRNDLLPYVNLEYAGS
KVLGSYYKSTSAEQREKFFKTFGELIEQKYAQALTNYSNQKIQIESEKELGDNNFINIRVNIIQANGVAPILLYFKWRKG
NKSGEWKVYDMVGAGVSMLEDTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ

Specific function: Unknown

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaC/ttg2D family

Homologues:

Organism=Escherichia coli, GI1789583, Length=207, Percent_Identity=42.0289855072464, Blast_Score=182, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1084_HAEIN (P45028)

Other databases:

- EMBL:   L42023
- PIR:   B64166
- RefSeq:   NP_439241.1
- ProteinModelPortal:   P45028
- GeneID:   950058
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1084
- NMPDR:   fig|71421.1.peg.1041
- TIGR:   HI_1084
- HOGENOM:   HBG430191
- OMA:   IDYKYAS
- ProtClustDB:   CLSK808481
- BioCyc:   HINF71421:HI_1084-MONOMER
- InterPro:   IPR023094
- InterPro:   IPR008869

Pfam domain/function: PF05494 Tol_Tol_Ttg2

EC number: NA

Molecular weight: Translated: 24511; Mature: 24511

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIQLKKWFTILTFVLTAFLVTRTAIAETSPYVLMQQAADKLFSDIQANQSKIKQDPNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRTIVRNDLLPYVNLEYAGSKVLGSYYKSTSAEQREKFFKTFGELIEQKYAQALTNYSNQ
HHHHHHHCCCCCEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KIQIESEKELGDNNFINIRVNIIQANGVAPILLYFKWRKGNKSGEWKVYDMVGAGVSMLE
EEEEECHHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEHHCCHHHHH
DTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNLIQLKKWFTILTFVLTAFLVTRTAIAETSPYVLMQQAADKLFSDIQANQSKIKQDPNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRTIVRNDLLPYVNLEYAGSKVLGSYYKSTSAEQREKFFKTFGELIEQKYAQALTNYSNQ
HHHHHHHCCCCCEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KIQIESEKELGDNNFINIRVNIIQANGVAPILLYFKWRKGNKSGEWKVYDMVGAGVSMLE
EEEEECHHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEHHCCHHHHH
DTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023