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The map label for this gene is dprA

Identifier: 16272923

GI number: 16272923

Start: 1041677

End: 1042798

Strand: Reverse

Name: dprA

Synonym: HI0985

Alternate gene names: 16272923

Gene position: 1042798-1041677 (Counterclockwise)

Preceding gene: 16272928

Following gene: 30995415

Centisome position: 56.98

GC content: 40.82

Gene sequence:

>1122_bases
ATGAATGACATTACCTACACATTACTCCGTTTAATGCAAGTGCCTAAACTTGGCGGCGTTGGCATTGATAAAATTTTGTC
CAATATTACCTTAAATGAATTACTTAATTATGATGATGTTGCTTTCCGACAAATGGGGTGGGGAGCCATCCAAATTCGCC
GTTGGTTCAAGCCTGAAGCAAAATTTATTGAGCCTGCACTTGTGTGGTCACAAAAAGAGGGAAATCATTTAGTGAATTAT
TTTTCCCCTTTTTATCCCTTTTTGTTGAAACAGACCGCAAGTTTTCCGCCACTATTATTTGTAAAAGGAAATTTAACCGC
ACTTTCACAACGCCAAATGGCAATGGTTGGAAGCCGTTATTGCACGACTTACGGAGAATATTGGGCAAAACATTTTGCGA
CAGAACTTTCATTAGCTGGCTTTACGATTACTAGTGGACTTGCATTAGGAATTGATGGACATTGCCATCAAGCTGTGGTC
AATATTCAAGGACAAACTATTGCGGTTTTAGGCAGTGGATTAGAACAAATCTATCCCTCTAAACATCAAAGATTATCGGC
ACAAATCATCGAAAATAATGGCGCATTAGTCTCTGAGTTCTTACCAAACCAAGCCCCCATTGCCGCTAATTTCCCACGTC
GTAATCGGATTATTAGCGGGCTTTCAGTCGGCACGCTTGTTGTTGAAGCCACAGAAAAAAGCGGCTCGCTTATTACTGCG
CGATATGCGTTGGAACAAAACCGAGAGGTTTTTGCTGTGCCGGGAAACATTCAAAATAAATCAAGTCAAGGTTGTCATCG
CCTAATTAAACAAGGTGCAATGTTGGTAGAAAATGCAAAGGACATTTTGGAAACTCTCTACCAACATTCAATCCATAGCC
AAACTGAAATTGATTTTGACCAGATCGCCGTGCCTAATTACACGCCACCACCTGATCCTCGTCGATTAGTAGAAGCACCA
AGCCACCCGAAACTTTATTCGCGTATTGGTTACACGCCAGTGAGCATTGATGATTTAGCGGAAGAATTTAATTTAAGCGT
CGATGTTTTGCTTGTTCAGTTGCTCGATCTTGAGTTGCAAGATCTTATCATAAGTGAAAATGGGTTATATAAACGCGTTT
AG

Upstream 100 bases:

>100_bases
AAAAAGAATTTTTGCGATCTGCATCGCAAAATGCTTTTAAATTAATCGTTTCTCTCCCTCGTTTTTTCCATACTAGATTT
TCAAATAAAAAGGAAAAAAT

Downstream 100 bases:

>100_bases
CGTAAATTTTTATGCTAAGATACGCCCATTCTTTTTTTCATAAAAGGACGATTATGTTAGCGATTATCTCCCCTGCCAAA
ACCCTTGATTTTGAAAGTGC

Product: DNA processing chain A

Products: NA

Alternate protein names: DNA-processing chain A

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALVWSQKEGNHLVNY
FSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV

Sequences:

>Translated_373_residues
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALVWSQKEGNHLVNY
FSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV
>Mature_373_residues
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALVWSQKEGNHLVNY
FSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family

Homologues:

Organism=Escherichia coli, GI48994932, Length=369, Percent_Identity=44.1734417344173, Blast_Score=262, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMF_HAEIN (P43862)

Other databases:

- EMBL:   U18657
- EMBL:   L42023
- PIR:   D64106
- RefSeq:   NP_439148.1
- ProteinModelPortal:   P43862
- GeneID:   949984
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0985
- NMPDR:   fig|71421.1.peg.952
- TIGR:   HI_0985
- HOGENOM:   HBG758551
- OMA:   AMLVENA
- ProtClustDB:   CLSK870541
- BioCyc:   HINF71421:HI_0985-MONOMER
- InterPro:   IPR003488
- TIGRFAMs:   TIGR00732

Pfam domain/function: PF02481 DNA_processg_A

EC number: NA

Molecular weight: Translated: 41640; Mature: 41640

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHCCCCHHHHHHCCCCCEEHHHHCCCCH
KFIEPALVWSQKEGNHLVNYFSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRY
HHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH
CTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYPS
HHHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCEEEEEECCCEEEEECCCHHHHCCC
KHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
HHHHHHHEEEECCCCCHHHHCCCCCCEECCCCHHHHHHCCCCEEEEEEEEECCCCCEEEE
RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFD
EEHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQ
HEECCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHH
DLIISENGLYKRV
HHEECCCCCCCCC
>Mature Secondary Structure
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHCCCCHHHHHHCCCCCEEHHHHCCCCH
KFIEPALVWSQKEGNHLVNYFSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRY
HHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH
CTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYPS
HHHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCEEEEEECCCEEEEECCCHHHHCCC
KHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
HHHHHHHEEEECCCCCHHHHCCCCCCEECCCCHHHHHHCCCCEEEEEEEEECCCCCEEEE
RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFD
EEHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQ
HEECCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHH
DLIISENGLYKRV
HHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800