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The map label for this gene is omp26

Identifier: 16272853

GI number: 16272853

Start: 970844

End: 971437

Strand: Reverse

Name: omp26

Synonym: HI0916

Alternate gene names: 16272853

Gene position: 971437-970844 (Counterclockwise)

Preceding gene: 16272854

Following gene: 16272852

Centisome position: 53.08

GC content: 35.02

Gene sequence:

>594_bases
ATGAAAAACATCGCAAAAGTAACCGCACTTGCTTTAGGTATTGCACTTGCTTCAGGCTATGCTTCCGCTGAAGAAAAAAT
TGCTTTCATTAATGCAGGTTATATTTTTCAACATCACCCAGATCGCCAAGCGGTAGCAGATAAACTTGATGCTGAATTTA
AACCTGTAGCTGAGAAATTAGCAGCAAGCAAAAAAGAAGTTGATGATAAAATTGCTGCTGCTCGTAAAAAAGTAGAAGCA
AAAGTTGCGGCTTTAGAAAAAGATGCACCTCGCTTACGTCAAGCTGATATTCAAAAACGCCAACAGGAAATTAATAAATT
AGGTGCGGCTGAAGATGCTGAATTACAAAAATTAATGCAAGAACAAGATAAAAAAGTTCAAGAATTCCAAGCTCAAAATG
AAAAACGTCAAGCTGAAGAACGTGGTAAATTATTAGATAGCATTCAAACTGCGACAAATAATTTAGCAAAAGCAAAAGGT
TATACTTATGTGCTTGATGCAAATTCAATTGTATTTGCGGTAGAGGGTAAAGATATTACTGAAGAAGTATTAAAATCTAT
CCCTGCTTCTGAAAAAGCACAAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
AACTTTTTTCTTCATCAGAACTCAAAAACAACGTTCTCTGCCTAATTTAATTGGGCAGAGAAAATATTAAACCCATCATT
TAATTAAGGATATTTATCAA

Downstream 100 bases:

>100_bases
TAGGTTCTCATAATGCAAAAATCCTATTCTTTACAAGAATTGGCAACTCAAATCGGCGCTACCGTTCGCGGTAACACCGA
TGTTGTTGTTGAGAATATCG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKLAASKKEVDDKIAAARKKVEA
KVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQEQDKKVQEFQAQNEKRQAEERGKLLDSIQTATNNLAKAKG
YTYVLDANSIVFAVEGKDITEEVLKSIPASEKAQEKK

Sequences:

>Translated_197_residues
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKLAASKKEVDDKIAAARKKVEA
KVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQEQDKKVQEFQAQNEKRQAEERGKLLDSIQTATNNLAKAKG
YTYVLDANSIVFAVEGKDITEEVLKSIPASEKAQEKK
>Mature_197_residues
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKLAASKKEVDDKIAAARKKVEA
KVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQEQDKKVQEFQAQNEKRQAEERGKLLDSIQTATNNLAKAKG
YTYVLDANSIVFAVEGKDITEEVLKSIPASEKAQEKK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family

Homologues:

Organism=Escherichia coli, GI1786375, Length=173, Percent_Identity=31.7919075144509, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): OM26_HAEIN (Q57483)

Other databases:

- EMBL:   L42023
- EMBL:   AF109085
- EMBL:   AF109086
- EMBL:   AF109087
- EMBL:   AF109094
- PIR:   E64102
- RefSeq:   NP_439076.1
- ProteinModelPortal:   Q57483
- SMR:   Q57483
- GeneID:   949929
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0916
- NMPDR:   fig|71421.1.peg.882
- TIGR:   HI_0916
- HOGENOM:   HBG495360
- OMA:   GYTYVLD
- ProtClustDB:   CLSK870690
- BioCyc:   HINF71421:HI_0916-MONOMER
- InterPro:   IPR005632
- SMART:   SM00935

Pfam domain/function: PF03938 OmpH; SSF111384 OM_chaperone_Skp/OmpH

EC number: NA

Molecular weight: Translated: 21718; Mature: 21718

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKL
CCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCEEEEECCCHHHHHHHHCCHHHHHHHHH
AASKKEVDDKIAAARKKVEAKVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EQDKKVQEFQAQNEKRQAEERGKLLDSIQTATNNLAKAKGYTYVLDANSIVFAVEGKDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCHH
EEVLKSIPASEKAQEKK
HHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MKNIAKVTALALGIALASGYASAEEKIAFINAGYIFQHHPDRQAVADKLDAEFKPVAEKL
CCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCEEEEECCCHHHHHHHHCCHHHHHHHHH
AASKKEVDDKIAAARKKVEAKVAALEKDAPRLRQADIQKRQQEINKLGAAEDAELQKLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EQDKKVQEFQAQNEKRQAEERGKLLDSIQTATNNLAKAKGYTYVLDANSIVFAVEGKDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCHH
EEVLKSIPASEKAQEKK
HHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 10085039; 10675023