Click here to switch to the map view.

The map label for this gene is yaaJ [C]

Identifier: 16272823

GI number: 16272823

Start: 934743

End: 936113

Strand: Reverse

Name: yaaJ [C]

Synonym: HI0883

Alternate gene names: 16272823

Gene position: 936113-934743 (Counterclockwise)

Preceding gene: 16272824

Following gene: 16272820

Centisome position: 51.15

GC content: 40.26

Gene sequence:

>1371_bases
ATGACAATTGAGTCAATTCTTTCAGCTATTGATAGCTTTATTTGGGGCGCACCTCTACTTATATTATTATCTGGTACAGG
ACTCTATTTAACGTTACGCTTAGGCTTCATTCAAATTCGCTACTTACCGCGCGCACTAGGTTATTTGTTCAAAAAAGATA
AAGGTGGAAAAGGAGACGTTTCCTCTTTTGCTGCACTTTGTACTGCATTAGCCGCAACAATTGGAACGGGTAATATTGTG
GGCGTTGCAACTGCGGTACAAGCAGGTGGGCCAGGGGCTATTTTTTGGATGTGGCTGGTTGCTTTGTTAGGAATGGCAAC
AAAATATGCTGAATGTTTACTCGCTGTTAAATACCGTGTTCGCGATAAAAATGGCTTTATGGCTGGCGGCCCGATGTATT
ACATTGAACGCGGACTAGGTATCAGATGGTTAGCAAAATTATTTGCATTATTTGGTGTGATGGTGGCCTTTTTCGGGATC
GGCACATTCCCACAGGTCAATGCGATTACCCATGCAATGCAAGATACTTTTAATATTCCAGTTTTAGTTACTGCAATTAT
TGTGACGCTTTTAGTCGGCTTAATTATTCTTGGCGGTGTAAAACGTATTGCAACCGCATCATCGGTAATTGTGCCGTTTA
TGGCGATTTTATACGTCACGACTTCACTGGTTATTATCCTTTTAAATATAGAAAAAGTACCAGATGCGATTTTATTGATT
ATTGATAGTGCTTTTGATCCACAAGCTGCATTAGGCGGTGCCGTAGGGCTTACTGTGATGAAAGCGATTCAATCAGGCGT
TGCGCGCGGCATTTTCTCCAATGAATCTGGTTTAGGAAGCGCACCAATTGCAGCTGCAGCGGCACAAACTCGTGAACCTG
TTCGACAAGGCTTAATTTCCATGACAGGTACATTCTTAGATACCATCATCGTCTGTACAATGACAGGTATTGTATTGGTA
TTAACGGGAGCGTGGAACAATCCTGAATTAGCGGGTGCTACTGTCACAAACTATGCCTTTGCACAAGGTTTAGGCACATC
AATTGGCGCAACGATTGTAACAGTTGGTTTATTATTTTTTGCATTCACGACTATTTTAGGTTGGTGTTACTACGGGGAAC
GTTGCTTTGTTTATCTCGTCGGTATTCGTGGCGTAAAACTATATCGTCTAGCTTATATTATGTTGGTTGGTTTAGGGGCA
TTCTTACACTTAAATTTAATATGGATTATCGCCGATATTGTAAATGGTTTGATGGCTTTCCCAAATCTTATCGCGCTTAT
TGGATTGCGAAAAGTGATCATTGAAGAAACAAAAGATTATTTTCAACGTTTAAAAATTAATCATTATGATCAAGATGAAG
TGATAAAATAG

Upstream 100 bases:

>100_bases
AAGTGTGGAAATTATTTATTTTTTTACCGCACTTTCTTTTCCATTGTATCTTTTCGTCTTCTTGTCGTGTTTATTTTGAT
TTAAACGACGAGGAATCACA

Downstream 100 bases:

>100_bases
TGAAATAAAAGGTGCTGTTCAGCAAATTCTGTGAAACAACACCTTTATTTTTCTATTTTTAATCAGCACTATAATATAAT
TTTCCGATTTCAATTTTTTG

Product: putative Na+/alanine symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MTIESILSAIDSFIWGAPLLILLSGTGLYLTLRLGFIQIRYLPRALGYLFKKDKGGKGDVSSFAALCTALAATIGTGNIV
GVATAVQAGGPGAIFWMWLVALLGMATKYAECLLAVKYRVRDKNGFMAGGPMYYIERGLGIRWLAKLFALFGVMVAFFGI
GTFPQVNAITHAMQDTFNIPVLVTAIIVTLLVGLIILGGVKRIATASSVIVPFMAILYVTTSLVIILLNIEKVPDAILLI
IDSAFDPQAALGGAVGLTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTREPVRQGLISMTGTFLDTIIVCTMTGIVLV
LTGAWNNPELAGATVTNYAFAQGLGTSIGATIVTVGLLFFAFTTILGWCYYGERCFVYLVGIRGVKLYRLAYIMLVGLGA
FLHLNLIWIIADIVNGLMAFPNLIALIGLRKVIIEETKDYFQRLKINHYDQDEVIK

Sequences:

>Translated_456_residues
MTIESILSAIDSFIWGAPLLILLSGTGLYLTLRLGFIQIRYLPRALGYLFKKDKGGKGDVSSFAALCTALAATIGTGNIV
GVATAVQAGGPGAIFWMWLVALLGMATKYAECLLAVKYRVRDKNGFMAGGPMYYIERGLGIRWLAKLFALFGVMVAFFGI
GTFPQVNAITHAMQDTFNIPVLVTAIIVTLLVGLIILGGVKRIATASSVIVPFMAILYVTTSLVIILLNIEKVPDAILLI
IDSAFDPQAALGGAVGLTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTREPVRQGLISMTGTFLDTIIVCTMTGIVLV
LTGAWNNPELAGATVTNYAFAQGLGTSIGATIVTVGLLFFAFTTILGWCYYGERCFVYLVGIRGVKLYRLAYIMLVGLGA
FLHLNLIWIIADIVNGLMAFPNLIALIGLRKVIIEETKDYFQRLKINHYDQDEVIK
>Mature_455_residues
TIESILSAIDSFIWGAPLLILLSGTGLYLTLRLGFIQIRYLPRALGYLFKKDKGGKGDVSSFAALCTALAATIGTGNIVG
VATAVQAGGPGAIFWMWLVALLGMATKYAECLLAVKYRVRDKNGFMAGGPMYYIERGLGIRWLAKLFALFGVMVAFFGIG
TFPQVNAITHAMQDTFNIPVLVTAIIVTLLVGLIILGGVKRIATASSVIVPFMAILYVTTSLVIILLNIEKVPDAILLII
DSAFDPQAALGGAVGLTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTREPVRQGLISMTGTFLDTIIVCTMTGIVLVL
TGAWNNPELAGATVTNYAFAQGLGTSIGATIVTVGLLFFAFTTILGWCYYGERCFVYLVGIRGVKLYRLAYIMLVGLGAF
LHLNLIWIIADIVNGLMAFPNLIALIGLRKVIIEETKDYFQRLKINHYDQDEVIK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family

Homologues:

Organism=Escherichia coli, GI1786188, Length=450, Percent_Identity=40.2222222222222, Blast_Score=290, Evalue=1e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y883_HAEIN (P44917)

Other databases:

- EMBL:   L42023
- PIR:   H64099
- RefSeq:   NP_439044.1
- GeneID:   949887
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0883
- TIGR:   HI_0883
- HOGENOM:   HBG671706
- OMA:   FAWGPPL
- ProtClustDB:   CLSK869961
- BioCyc:   HINF71421:HI_0883-MONOMER
- InterPro:   IPR001463
- PRINTS:   PR00175
- TIGRFAMs:   TIGR00835

Pfam domain/function: PF01235 Na_Ala_symp

EC number: NA

Molecular weight: Translated: 48828; Mature: 48697

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd938850)-; HASH(0xb0f4370)-; HASH(0xce9a288)-; HASH(0xd4983e4)-; HASH(0xb65e0cc)-; HASH(0xb3f2f3c)-; HASH(0xc7e8f18)-; HASH(0xd5698e8)-; HASH(0xd687650)-; HASH(0xcff74fc)-; HASH(0xbe6588c)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIESILSAIDSFIWGAPLLILLSGTGLYLTLRLGFIQIRYLPRALGYLFKKDKGGKGDV
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SSFAALCTALAATIGTGNIVGVATAVQAGGPGAIFWMWLVALLGMATKYAECLLAVKYRV
HHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
RDKNGFMAGGPMYYIERGLGIRWLAKLFALFGVMVAFFGIGTFPQVNAITHAMQDTFNIP
ECCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH
VLVTAIIVTLLVGLIILGGVKRIATASSVIVPFMAILYVTTSLVIILLNIEKVPDAILLI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
IDSAFDPQAALGGAVGLTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTREPVRQGLIS
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MTGTFLDTIIVCTMTGIVLVLTGAWNNPELAGATVTNYAFAQGLGTSIGATIVTVGLLFF
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFTTILGWCYYGERCFVYLVGIRGVKLYRLAYIMLVGLGAFLHLNLIWIIADIVNGLMAF
HHHHHHHHHHHCCHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PNLIALIGLRKVIIEETKDYFQRLKINHYDQDEVIK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCH
>Mature Secondary Structure 
TIESILSAIDSFIWGAPLLILLSGTGLYLTLRLGFIQIRYLPRALGYLFKKDKGGKGDV
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SSFAALCTALAATIGTGNIVGVATAVQAGGPGAIFWMWLVALLGMATKYAECLLAVKYRV
HHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
RDKNGFMAGGPMYYIERGLGIRWLAKLFALFGVMVAFFGIGTFPQVNAITHAMQDTFNIP
ECCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH
VLVTAIIVTLLVGLIILGGVKRIATASSVIVPFMAILYVTTSLVIILLNIEKVPDAILLI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
IDSAFDPQAALGGAVGLTVMKAIQSGVARGIFSNESGLGSAPIAAAAAQTREPVRQGLIS
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MTGTFLDTIIVCTMTGIVLVLTGAWNNPELAGATVTNYAFAQGLGTSIGATIVTVGLLFF
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFTTILGWCYYGERCFVYLVGIRGVKLYRLAYIMLVGLGAFLHLNLIWIIADIVNGLMAF
HHHHHHHHHHHCCHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PNLIALIGLRKVIIEETKDYFQRLKINHYDQDEVIK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800