Click here to switch to the map view.

The map label for this gene is atoE

Identifier: 16272713

GI number: 16272713

Start: 834686

End: 836029

Strand: Reverse

Name: atoE

Synonym: HI0772

Alternate gene names: 16272713

Gene position: 836029-834686 (Counterclockwise)

Preceding gene: 16272714

Following gene: 16272712

Centisome position: 45.68

GC content: 41.0

Gene sequence:

>1344_bases
ATGATTAGTCGCGTTTCTCGTTTTATGACGACATTCGTCAGTAAATACCTGCCAGACCCACTTATTTTTGCCGTGTTACT
CACCTTTGTCACATTCATTTGTGCTTGGGGATTAACCGATAGTACACCTGTTGATTTAGTTAATATGTGGGGTAATGGCT
TTTGGAATTTACTTGGTTTTGGTATGCAAATGGCATTAATTGTCGTAACTGGTAATGCTCTTGCAACCTCACCACAAATT
CGTAAGTTTCTTTCTACAATCGCTTCAATCGCAAAAACACCAGCACAAGGTGTTGTCTTAGTTACGTTTATGGGTTCAAT
TGCCTGTATCATTAACTGGGGCTTCGGTTTGGTCGTTGGTGCGATGTTTGCAAAAGAAGTCGCGCGGAGAATAAAAGGCA
GTGACTACGCCTTACTGATTGCCTGTGCCTATATTGCATTTATGACATGGGGTGGAGGTTTTTCAGGCTCAATGCCACTT
TTAGCCGCAACACCAGGCAACCCAGTTGCTCATTTAATGATGAGCGAAAGCAACCCACAAGGTATTATTCCTGCAGTTAG
TACGCTTTTCTCTGGGTACAATATTTTTATCACGTTAAGTTTAGTCATTTGCTTGCCTTTCATTACCTATATGATGATGC
CCAAAAATGGCGAAACAAAAAGTATTGATCCAAAACTTATTGCGCCCGATCCAACATTTGATAAAAAATTGGATAAAGAT
GCAACACTTGCTGAAAAAATGGAAGAAAGCCGCTTCTTAGCCTATACAATCGGGGCATTAGGATATAGTTACCTCGGTAT
GTATTTCTACAAAAACGGATTCAATCTCACAATTAATAATGTAAACCTTATTTTCTTAATCACAGGAATTGTGCTTCATG
GCTCGCCAATGGCCTATATGCGAGCAATTATTAATGCCACACGAAGCACAGCAGGGATCTTAGTGCAATTCCCATTCTAT
GCGGGTGTGCAACTAATGATGGAGCATTCAGGCTTAGGTGGTTTAATCACCGAATTCTTTATCAATGTTGCTAACAAAGA
TTCTTTCCCATTATTAACCTTCTTTAGTTCTGCCTTTATTAACTTTGCAGTTCCTTCTGGTGGCGGTCACTGGGTCATCC
AAGGACCATTTGTTATCCCTGCTGCTCAAGCATTAGGTGCAGATCTAGGTAAGTCTACAATGGCGATTGCCTATGGTGAG
CAATGGATGAACATGGCTCAGCCATTTTGGGCATTACCAGCACTGGGTATCGCAGGGCTTGGCGTGAGAGATATTATGGG
CTTCTGTATGACCGCACTTATCTTCACCGCACCAATTTTTATTATTGGTTTATATTTCTTATAG

Upstream 100 bases:

>100_bases
CTCATGTGGATTTAGAAACAATTAAAGCCAAAACAGAAGCCGATTTCATTGTTGCCGATGATTTCAAAGAAATGCAAATC
AGCCAGAAAGGACTTGAATT

Downstream 100 bases:

>100_bases
AAAAGGAGTTAAAAATGGAAAATGTTGTTATTGTTAGTGCAGTTAGAACACCGATCGGCAGCTTTAATGGTGCATTATCT
TCCGTAAGTGCGGTTGATTT

Product: short chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MISRVSRFMTTFVSKYLPDPLIFAVLLTFVTFICAWGLTDSTPVDLVNMWGNGFWNLLGFGMQMALIVVTGNALATSPQI
RKFLSTIASIAKTPAQGVVLVTFMGSIACIINWGFGLVVGAMFAKEVARRIKGSDYALLIACAYIAFMTWGGGFSGSMPL
LAATPGNPVAHLMMSESNPQGIIPAVSTLFSGYNIFITLSLVICLPFITYMMMPKNGETKSIDPKLIAPDPTFDKKLDKD
ATLAEKMEESRFLAYTIGALGYSYLGMYFYKNGFNLTINNVNLIFLITGIVLHGSPMAYMRAIINATRSTAGILVQFPFY
AGVQLMMEHSGLGGLITEFFINVANKDSFPLLTFFSSAFINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSTMAIAYGE
QWMNMAQPFWALPALGIAGLGVRDIMGFCMTALIFTAPIFIIGLYFL

Sequences:

>Translated_447_residues
MISRVSRFMTTFVSKYLPDPLIFAVLLTFVTFICAWGLTDSTPVDLVNMWGNGFWNLLGFGMQMALIVVTGNALATSPQI
RKFLSTIASIAKTPAQGVVLVTFMGSIACIINWGFGLVVGAMFAKEVARRIKGSDYALLIACAYIAFMTWGGGFSGSMPL
LAATPGNPVAHLMMSESNPQGIIPAVSTLFSGYNIFITLSLVICLPFITYMMMPKNGETKSIDPKLIAPDPTFDKKLDKD
ATLAEKMEESRFLAYTIGALGYSYLGMYFYKNGFNLTINNVNLIFLITGIVLHGSPMAYMRAIINATRSTAGILVQFPFY
AGVQLMMEHSGLGGLITEFFINVANKDSFPLLTFFSSAFINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSTMAIAYGE
QWMNMAQPFWALPALGIAGLGVRDIMGFCMTALIFTAPIFIIGLYFL
>Mature_447_residues
MISRVSRFMTTFVSKYLPDPLIFAVLLTFVTFICAWGLTDSTPVDLVNMWGNGFWNLLGFGMQMALIVVTGNALATSPQI
RKFLSTIASIAKTPAQGVVLVTFMGSIACIINWGFGLVVGAMFAKEVARRIKGSDYALLIACAYIAFMTWGGGFSGSMPL
LAATPGNPVAHLMMSESNPQGIIPAVSTLFSGYNIFITLSLVICLPFITYMMMPKNGETKSIDPKLIAPDPTFDKKLDKD
ATLAEKMEESRFLAYTIGALGYSYLGMYFYKNGFNLTINNVNLIFLITGIVLHGSPMAYMRAIINATRSTAGILVQFPFY
AGVQLMMEHSGLGGLITEFFINVANKDSFPLLTFFSSAFINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSTMAIAYGE
QWMNMAQPFWALPALGIAGLGVRDIMGFCMTALIFTAPIFIIGLYFL

Specific function: Responsible for the intake of short-chain fatty acids

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=444, Percent_Identity=72.972972972973, Blast_Score=671, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATOE_HAEIN (P44051)

Other databases:

- EMBL:   L42023
- PIR:   F64013
- RefSeq:   NP_438931.1
- GeneID:   949788
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0772
- NMPDR:   fig|71421.1.peg.740
- TIGR:   HI_0772
- HOGENOM:   HBG697931
- OMA:   LGFSMQM
- ProtClustDB:   CLSK2392627
- BioCyc:   HINF71421:HI_0772-MONOMER
- InterPro:   IPR006161
- InterPro:   IPR006160
- TIGRFAMs:   TIGR00366

Pfam domain/function: PF02667 SCFA_trans

EC number: NA

Molecular weight: Translated: 48444; Mature: 48444

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc4227ec)-; HASH(0xce0f1c8)-; HASH(0xc315d48)-; HASH(0xd1007a0)-; HASH(0xc5696d8)-; HASH(0xd6c4944)-; HASH(0xd789628)-; HASH(0xd492e2c)-; HASH(0xb70e4c0)-; HASH(0xafe5a40)-; HASH(0xcf460d8)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRVSRFMTTFVSKYLPDPLIFAVLLTFVTFICAWGLTDSTPVDLVNMWGNGFWNLLGF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHH
GMQMALIVVTGNALATSPQIRKFLSTIASIAKTPAQGVVLVTFMGSIACIINWGFGLVVG
HHHEEEEEEECCCHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCHHHHHH
AMFAKEVARRIKGSDYALLIACAYIAFMTWGGGFSGSMPLLAATPGNPVAHLMMSESNPQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCC
GIIPAVSTLFSGYNIFITLSLVICLPFITYMMMPKNGETKSIDPKLIAPDPTFDKKLDKD
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCC
ATLAEKMEESRFLAYTIGALGYSYLGMYFYKNGFNLTINNVNLIFLITGIVLHGSPMAYM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCEEEECCEEEEEEEHHHHHCCCCHHHH
RAIINATRSTAGILVQFPFYAGVQLMMEHSGLGGLITEFFINVANKDSFPLLTFFSSAFI
HHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
NFAVPSGGGHWVIQGPFVIPAAQALGADLGKSTMAIAYGEQWMNMAQPFWALPALGIAGL
EEEECCCCCEEEEECCEEEHHHHHHCCCCCCCCEEEEECHHHHHHCCHHHHHHHHHHCCC
GVRDIMGFCMTALIFTAPIFIIGLYFL
CHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MISRVSRFMTTFVSKYLPDPLIFAVLLTFVTFICAWGLTDSTPVDLVNMWGNGFWNLLGF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHH
GMQMALIVVTGNALATSPQIRKFLSTIASIAKTPAQGVVLVTFMGSIACIINWGFGLVVG
HHHEEEEEEECCCHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCHHHHHH
AMFAKEVARRIKGSDYALLIACAYIAFMTWGGGFSGSMPLLAATPGNPVAHLMMSESNPQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCC
GIIPAVSTLFSGYNIFITLSLVICLPFITYMMMPKNGETKSIDPKLIAPDPTFDKKLDKD
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCC
ATLAEKMEESRFLAYTIGALGYSYLGMYFYKNGFNLTINNVNLIFLITGIVLHGSPMAYM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCEEEECCEEEEEEEHHHHHCCCCHHHH
RAIINATRSTAGILVQFPFYAGVQLMMEHSGLGGLITEFFINVANKDSFPLLTFFSSAFI
HHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
NFAVPSGGGHWVIQGPFVIPAAQALGADLGKSTMAIAYGEQWMNMAQPFWALPALGIAGL
EEEECCCCCEEEEECCEEEHHHHHHCCCCCCCCEEEEECHHHHHHCCHHHHHHHHHHCCC
GVRDIMGFCMTALIFTAPIFIIGLYFL
CHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800