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The map label for this gene is glpC

Identifier: 16272625

GI number: 16272625

Start: 725508

End: 726788

Strand: Reverse

Name: glpC

Synonym: HI0683

Alternate gene names: 16272625

Gene position: 726788-725508 (Counterclockwise)

Preceding gene: 16272626

Following gene: 16272623

Centisome position: 39.71

GC content: 36.22

Gene sequence:

>1281_bases
ATGGATAATAATATTCAACGACTCATTGATAGTGCAAAACAATCCCTTAATTCGCCTGAAAGCTATAAATATATTGATGA
AAGTTTTGAAAGCTGTATTAAATGTACTGCTTGTACTGCTGTTTGTCCTGTTTCACGTAATAATCCGCTTTATCCAGGGC
CAAAACAATCTGGCCCAGATGGTGAGCGTTTACGCTTAAAATCTGCTGAACTTTATGATGAAGCACTTAAATATTGCACC
AACTGTAAACGTTGTGAAGTGGCTTGTCCGTCTGATGTGAAAATTGGCGATTTAATTGTACGTGCGCGTAATAATCACTT
AGCGCAGTCTAAAAAACCGTTAATGAATAAATTGCGTGATGCGATTTTAAGTAACACAGATGTAATGGGGAAAATCAATA
CTCCACTTGCCCCCATTGTGAACACCATTACGGGTCTGAAAGCCACCAAATTTATGTTGGAAAAAACCCTTAATATCAGT
AAGAAACGTACTTTACCTAAATATGCGTTTGGTACGTTCCGTAGCTGGTATATGAAAAATGCGCTACAAGACCAACAAAA
ATTTGAGCGAAAAGTAGCATATTTCCACGGTTGTTATGTTAATTATAATAATCCACAGCTTGGCAAAGAATTCCTTAAAG
TGTTCAATGCGATGAATATTGGGGTAATGTTATTAGAAAAAGAAAAATGCTGTGGCTTACCATTAATGGTAAACGGTTTT
CCTAATCGCGCTCGTAATATTGCACAATTCAATACCGATTACATTGGAAAAATGGTAGATGAAAATGGAATAGATGTGAT
TAGTGAGGCATCAAGTTGTTCACTTAATCTGCGTGACGAATACCATCATATTTTAGGTATCGATAACGCCAAAGTCCGTC
CGCATATCCATATGGTAACCCCATTTTTATATCAGCTTTTCAAAGAAGGTAAAACATTACCGTTGAAACCACTTAAACTT
AGAGTGGCTTATCACACCGCTTGTCACGTAGATAAGGCGGGTTGGGCACCTTATACTTTGGAAGTGTTGAAAAAAATTCC
GAGTTTAGAAATCATTATGTTACCTAGCCAATGCTGTGGTATTGCTGGGACTTACGGTTTTAAATCAGAAAACTATGAAA
TTTCACAATCTATTGGTAAAAATCTATTCGATAATATTAACGAGGGTGGATTTGATTACGTTATATCTGAATGTCAAACC
TGTAAATGGCAAATTGATATGTCATCTAACGTGACTTGTATTCATCCATTAACTTTACTTTGTATGTCGATGGATGCTTA
A

Upstream 100 bases:

>100_bases
GTGGTTTTAATGCCCTTGAACTTGGTTGTGGTTCGGGTGTGGCTGTTGTAACTGCCTTGGCAGTGGCAGATGAAATCTTA
GCGAAATAAGGGGGAATAAT

Downstream 100 bases:

>100_bases
ATAAGAAAAATGCATGTGGTAATTAACGTGCATTTTTATGATTAATTTTATCTATGAAAAAACCGACTTTATATTGACAA
AGTCGGTTTTTAATTCAGTT

Product: sn-glycerol-3-phosphate dehydrogenase subunit C

Products: glycerone phosphate; reduced acceptor

Alternate protein names: G-3-P dehydrogenase

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MDNNIQRLIDSAKQSLNSPESYKYIDESFESCIKCTACTAVCPVSRNNPLYPGPKQSGPDGERLRLKSAELYDEALKYCT
NCKRCEVACPSDVKIGDLIVRARNNHLAQSKKPLMNKLRDAILSNTDVMGKINTPLAPIVNTITGLKATKFMLEKTLNIS
KKRTLPKYAFGTFRSWYMKNALQDQQKFERKVAYFHGCYVNYNNPQLGKEFLKVFNAMNIGVMLLEKEKCCGLPLMVNGF
PNRARNIAQFNTDYIGKMVDENGIDVISEASSCSLNLRDEYHHILGIDNAKVRPHIHMVTPFLYQLFKEGKTLPLKPLKL
RVAYHTACHVDKAGWAPYTLEVLKKIPSLEIIMLPSQCCGIAGTYGFKSENYEISQSIGKNLFDNINEGGFDYVISECQT
CKWQIDMSSNVTCIHPLTLLCMSMDA

Sequences:

>Translated_426_residues
MDNNIQRLIDSAKQSLNSPESYKYIDESFESCIKCTACTAVCPVSRNNPLYPGPKQSGPDGERLRLKSAELYDEALKYCT
NCKRCEVACPSDVKIGDLIVRARNNHLAQSKKPLMNKLRDAILSNTDVMGKINTPLAPIVNTITGLKATKFMLEKTLNIS
KKRTLPKYAFGTFRSWYMKNALQDQQKFERKVAYFHGCYVNYNNPQLGKEFLKVFNAMNIGVMLLEKEKCCGLPLMVNGF
PNRARNIAQFNTDYIGKMVDENGIDVISEASSCSLNLRDEYHHILGIDNAKVRPHIHMVTPFLYQLFKEGKTLPLKPLKL
RVAYHTACHVDKAGWAPYTLEVLKKIPSLEIIMLPSQCCGIAGTYGFKSENYEISQSIGKNLFDNINEGGFDYVISECQT
CKWQIDMSSNVTCIHPLTLLCMSMDA
>Mature_426_residues
MDNNIQRLIDSAKQSLNSPESYKYIDESFESCIKCTACTAVCPVSRNNPLYPGPKQSGPDGERLRLKSAELYDEALKYCT
NCKRCEVACPSDVKIGDLIVRARNNHLAQSKKPLMNKLRDAILSNTDVMGKINTPLAPIVNTITGLKATKFMLEKTLNIS
KKRTLPKYAFGTFRSWYMKNALQDQQKFERKVAYFHGCYVNYNNPQLGKEFLKVFNAMNIGVMLLEKEKCCGLPLMVNGF
PNRARNIAQFNTDYIGKMVDENGIDVISEASSCSLNLRDEYHHILGIDNAKVRPHIHMVTPFLYQLFKEGKTLPLKPLKL
RVAYHTACHVDKAGWAPYTLEVLKKIPSLEIIMLPSQCCGIAGTYGFKSENYEISQSIGKNLFDNINEGGFDYVISECQT
CKWQIDMSSNVTCIHPLTLLCMSMDA

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1788576, Length=399, Percent_Identity=58.8972431077694, Blast_Score=506, Evalue=1e-144,
Organism=Escherichia coli, GI48994913, Length=441, Percent_Identity=20.8616780045351, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLPC_HAEIN (P43801)

Other databases:

- EMBL:   L42023
- PIR:   C64086
- RefSeq:   NP_438843.1
- ProteinModelPortal:   P43801
- SMR:   P43801
- GeneID:   949971
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0683
- NMPDR:   fig|71421.1.peg.653
- TIGR:   HI_0683
- HOGENOM:   HBG404065
- OMA:   EALKYCT
- ProtClustDB:   PRK11168
- BioCyc:   HINF71421:HI_0683-MONOMER
- GO:   GO:0006810
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051
- Gene3D:   G3DSA:1.10.1060.10
- TIGRFAMs:   TIGR03379

Pfam domain/function: PF02754 CCG; SSF46548 Helical_ferredxn

EC number: 1.1.99.5

Molecular weight: Translated: 48069; Mature: 48069

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNIQRLIDSAKQSLNSPESYKYIDESFESCIKCTACTAVCPVSRNNPLYPGPKQSGPD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GERLRLKSAELYDEALKYCTNCKRCEVACPSDVKIGDLIVRARNNHLAQSKKPLMNKLRD
CCCEEEHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHH
AILSNTDVMGKINTPLAPIVNTITGLKATKFMLEKTLNISKKRTLPKYAFGTFRSWYMKN
HHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH
ALQDQQKFERKVAYFHGCYVNYNNPQLGKEFLKVFNAMNIGVMLLEKEKCCGLPLMVNGF
HHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCC
PNRARNIAQFNTDYIGKMVDENGIDVISEASSCSLNLRDEYHHILGIDNAKVRPHIHMVT
CHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCEEECCHHHHHHCCCCCCCCCCEEEHHH
PFLYQLFKEGKTLPLKPLKLRVAYHTACHVDKAGWAPYTLEVLKKIPSLEIIMLPSQCCG
HHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECHHHCC
IAGTYGFKSENYEISQSIGKNLFDNINEGGFDYVISECQTCKWQIDMSSNVTCIHPLTLL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEECCCCEEEHHHHHHH
CMSMDA
HHHCCC
>Mature Secondary Structure
MDNNIQRLIDSAKQSLNSPESYKYIDESFESCIKCTACTAVCPVSRNNPLYPGPKQSGPD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GERLRLKSAELYDEALKYCTNCKRCEVACPSDVKIGDLIVRARNNHLAQSKKPLMNKLRD
CCCEEEHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHH
AILSNTDVMGKINTPLAPIVNTITGLKATKFMLEKTLNISKKRTLPKYAFGTFRSWYMKN
HHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH
ALQDQQKFERKVAYFHGCYVNYNNPQLGKEFLKVFNAMNIGVMLLEKEKCCGLPLMVNGF
HHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCC
PNRARNIAQFNTDYIGKMVDENGIDVISEASSCSLNLRDEYHHILGIDNAKVRPHIHMVT
CHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCEEECCHHHHHHCCCCCCCCCCEEEHHH
PFLYQLFKEGKTLPLKPLKLRVAYHTACHVDKAGWAPYTLEVLKKIPSLEIIMLPSQCCG
HHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECHHHCC
IAGTYGFKSENYEISQSIGKNLFDNINEGGFDYVISECQTCKWQIDMSSNVTCIHPLTLL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEECCCCEEEHHHHHHH
CMSMDA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sn-glycerol 3-phosphate; acceptor

Specific reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800