| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is yfcZ [C]
Identifier: 16272579
GI number: 16272579
Start: 678239
End: 678529
Strand: Reverse
Name: yfcZ [C]
Synonym: HI0636
Alternate gene names: 16272579
Gene position: 678529-678239 (Counterclockwise)
Preceding gene: 16272580
Following gene: 30995391
Centisome position: 37.08
GC content: 34.36
Gene sequence:
>291_bases ATGGCAATTCAAACCGAAAAACCGATTGAATGTGTAGGTTGTAATACTTTTGATATGAAATCACTTTTCGATAATCGTGA TTGTAGTCAGGTTATTGAATATATTTATGACAGTGAAGGACAAGCGCAAGAAGCACTCGCATTTTTTACTCAGAAAGCAC GTGATGTAGAAAGTGAACCTTGTGAAATTCAATCTGAAATTACAAAAGTGGATGATGGCTATTTATTAAAGGCAGATTTC ACTTTCTGTTGCCAAGCTGAATTGGTGATTTTTCAAATGCGTATTGCATAA
Upstream 100 bases:
>100_bases TGCGGAAAAAGCTCGTGCAAAAGCACAAGAAACCTTGGCGAAAGTGTATGAAGCAGTGGGTTTTGTCGCTGCAAAATAAT CTGAATAAAAGGATAATATT
Downstream 100 bases:
>100_bases GAAAAACAGCTGAAAAATAAGCCGCACTTTTGCGGCTTATTTTGAACCTATCCCAAACGTAGGGTGGGCTTTAGCCACAA AATATCTCGCGATTGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MAIQTEKPIECVGCNTFDMKSLFDNRDCSQVIEYIYDSEGQAQEALAFFTQKARDVESEPCEIQSEITKVDDGYLLKADF TFCCQAELVIFQMRIA
Sequences:
>Translated_96_residues MAIQTEKPIECVGCNTFDMKSLFDNRDCSQVIEYIYDSEGQAQEALAFFTQKARDVESEPCEIQSEITKVDDGYLLKADF TFCCQAELVIFQMRIA >Mature_95_residues AIQTEKPIECVGCNTFDMKSLFDNRDCSQVIEYIYDSEGQAQEALAFFTQKARDVESEPCEIQSEITKVDDGYLLKADFT FCCQAELVIFQMRIA
Specific function: Unknown
COG id: COG3691
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0381 family
Homologues:
Organism=Escherichia coli, GI87082087, Length=90, Percent_Identity=40, Blast_Score=76, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y636_HAEIN (P44027)
Other databases:
- EMBL: L42023 - PIR: I64010 - RefSeq: NP_438796.1 - ProteinModelPortal: P44027 - SMR: P44027 - GeneID: 949687 - GenomeReviews: L42023_GR - KEGG: hin:HI0636 - NMPDR: fig|71421.1.peg.606 - TIGR: HI_0636 - HOGENOM: HBG298790 - OMA: CEIQSEI - ProtClustDB: CLSK808433 - BioCyc: HINF71421:HI_0636-MONOMER - InterPro: IPR005272 - TIGRFAMs: TIGR00743
Pfam domain/function: PF04175 DUF406
EC number: NA
Molecular weight: Translated: 10966; Mature: 10835
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQTEKPIECVGCNTFDMKSLFDNRDCSQVIEYIYDSEGQAQEALAFFTQKARDVESEP CCCCCCCCCEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC CEIQSEITKVDDGYLLKADFTFCCQAELVIFQMRIA CHHHHHHHCCCCCEEEECCCCCHHHHEEEEEEEECC >Mature Secondary Structure AIQTEKPIECVGCNTFDMKSLFDNRDCSQVIEYIYDSEGQAQEALAFFTQKARDVESEP CCCCCCCCEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC CEIQSEITKVDDGYLLKADFTFCCQAELVIFQMRIA CHHHHHHHCCCCCEEEECCCCCHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800