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The map label for this gene is rseB

Identifier: 16272573

GI number: 16272573

Start: 669086

End: 670033

Strand: Direct

Name: rseB

Synonym: HI0630

Alternate gene names: 16272573

Gene position: 669086-670033 (Clockwise)

Preceding gene: 16272572

Following gene: 16272575

Centisome position: 36.56

GC content: 35.02

Gene sequence:

>948_bases
ATGAAAAAAATCCCATTAAAATTTACCGCACTTTCTCTTTCTTTGCTATTAAGTAGCATTGCTTCTGCTGAAGAGCTTTC
TGCGAAGCAGTCTTTAGATAAAATGACACAAGCATTGGATAATCTCAATTATGAAATTGCCTTTGTGCAAACTACTCCAG
CAAATATGGATTCATTTCGTTATCGACATATCAAACAAGATAACAAAACCTACGCACAATTAGTTACTTTAGATGGTCGC
CAGCAAGAAATTATTCAACGTGATAATTTAGTCAGTTATTTTCAGCCAAATGCTCAAGCATTTACGCTTAATAGTGGCAA
TATAGTTGATGCGATGCCTGCGGTTGTGCGTGCAAATTTTGATAAGCTTTCTTCTGATTATGATTTCGTAAAATTAGGTA
AAGATCGCGTTGCTGGGCGTTTCGCTGATACGATTAGAATTGTTCCTAAAGATGATTTTCGGTATCAATATTTGGTGTTT
ATCGATGAAGAAAATGGCTTGTTATTACGCAGTGATATGCTTGATCGCGAAGGCAAGCTACTTGATCAATTTAGAGTTGT
AACACTTTACATCGATGACAGATTGAGAGGATTAACGGATTATATTAACAAGGTATCATTGCCCCCTTTATTGAAAGAAA
GTAAAAATGAACAAAGTTCAGATATAACTTGGTCTGCAGGTTGGTTGCCACAAGGTTTTTCTTTAATTCGATATACTCAA
GAAATATTAGAAAATGAAATCATAGATAGTGCATTATATAGTGATGGCTTATTTACTTTTACGTTGTTTGTCTCTAATGT
AGGCTCTAATGACCTACCAGAAAATACTTGGAAACAAGGGGCTTATACGATTTATAGCGAGGTCATCGGAGGAAAAGAAA
TTACTTTTATTGGGCAATTACCAATCTCGACGGCAAAACGCATTGTACAAGAAGTCAAATTTAGATAA

Upstream 100 bases:

>100_bases
AGTAGCAGTCAAGTAAGATAAATTGGTTTCCTTTGTTCAGATTATTGATTCACCACCTAATTGTTATTTAGTGTGGTGAA
TTTTTATCCTTTAGATTTCT

Downstream 100 bases:

>100_bases
AAAGTGCGGTAATTTTTTACGATATTTTTATCAATAACTGATTTTGAGTTAGGCATTGACTAAGATTCGCACGTTTTTAC
GTGCGAATTTTTATTTTCTT

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFRYRHIKQDNKTYAQLVTLDGR
QQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANFDKLSSDYDFVKLGKDRVAGRFADTIRIVPKDDFRYQYLVF
IDEENGLLLRSDMLDREGKLLDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQLPISTAKRIVQEVKFR

Sequences:

>Translated_315_residues
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFRYRHIKQDNKTYAQLVTLDGR
QQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANFDKLSSDYDFVKLGKDRVAGRFADTIRIVPKDDFRYQYLVF
IDEENGLLLRSDMLDREGKLLDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQLPISTAKRIVQEVKFR
>Mature_315_residues
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFRYRHIKQDNKTYAQLVTLDGR
QQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANFDKLSSDYDFVKLGKDRVAGRFADTIRIVPKDDFRYQYLVF
IDEENGLLLRSDMLDREGKLLDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQLPISTAKRIVQEVKFR

Specific function: Seems to modulate the activity of rpoE (sigma-E)

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family

Homologues:

Organism=Escherichia coli, GI1788924, Length=317, Percent_Identity=38.801261829653, Blast_Score=240, Evalue=8e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSEB_HAEIN (P44792)

Other databases:

- EMBL:   L42023
- PIR:   H64082
- RefSeq:   NP_438790.1
- ProteinModelPortal:   P44792
- SMR:   P44792
- GeneID:   949706
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0630
- NMPDR:   fig|71421.1.peg.600
- TIGR:   HI_0630
- HOGENOM:   HBG391417
- OMA:   FIEHDQP
- ProtClustDB:   PRK09455
- BioCyc:   HINF71421:HI_0630-MONOMER
- InterPro:   IPR005588

Pfam domain/function: PF03888 MucB_RseB

EC number: NA

Molecular weight: Translated: 35907; Mature: 35907

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHH
YRHIKQDNKTYAQLVTLDGRQQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANF
HHHHCCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCH
DKLSSDYDFVKLGKDRVAGRFADTIRIVPKDDFRYQYLVFIDEENGLLLRSDMLDREGKL
HHHCCCCCCEECCCHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCEEEEHHHCCCCCCH
LDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
HHHEEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQL
HHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEECC
PISTAKRIVQEVKFR
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHH
YRHIKQDNKTYAQLVTLDGRQQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANF
HHHHCCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCH
DKLSSDYDFVKLGKDRVAGRFADTIRIVPKDDFRYQYLVFIDEENGLLLRSDMLDREGKL
HHHCCCCCCEECCCHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCEEEEHHHCCCCCCH
LDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
HHHEEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQL
HHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEECC
PISTAKRIVQEVKFR
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800