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The map label for this gene is hslR

Identifier: 16272505

GI number: 16272505

Start: 581951

End: 582346

Strand: Direct

Name: hslR

Synonym: HI0562

Alternate gene names: 16272505

Gene position: 581951-582346 (Clockwise)

Preceding gene: 16272496

Following gene: 16272507

Centisome position: 31.8

GC content: 38.64

Gene sequence:

>396_bases
ATGGCAGAAAAAGAAGTCAGATTAGATAAATGGTTGTGGGCTGCCCGATTTTACAAAACACGGAGCATTGCTAAAGCGAT
GATTGAAAGTGGTAAAGTGCATTACAACAATCAACGTGCGAAAGTAAGTAAAATTGTGGAAGTGGGCGCAATGTTAAAAC
TTCGCCAGGGAAACGAAGAAAAAGAAATAAAAATTATCGCCTTAAGCGATCAACGCCGAGGTGCGCCAGAAGCACAATTA
CTCTATCAAGAAACCGAAAGTAGCGTGAAAAAAAGAGAAGAAATCGCATGGGCAAGAAAAAATAATTCCCTTTCAATGCC
CCATCCTGATCGTCGCCCAAATAAAAAAGAGCGGAGAGATTTATTGAAATTTAAACACCAAGATAAATTTGAATAA

Upstream 100 bases:

>100_bases
TTCATTTAATAAAAATCCTATTAAAGAATAAAATTTTTAATAACAGTTCATTAGCATACTTTGTGGTACTATTTTGTCGA
ATCAAAATAAGGAGAAAATA

Downstream 100 bases:

>100_bases
AAATTTCACCGCACTTTCTATGTTCTTAAGGTTTAATATCTCGCAAAATTGGATTTTGCATTGAAATCAAGGTTTCAGTG
GATTGAATTTCATCAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: HSP15

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAEKEVRLDKWLWAARFYKTRSIAKAMIESGKVHYNNQRAKVSKIVEVGAMLKLRQGNEEKEIKIIALSDQRRGAPEAQL
LYQETESSVKKREEIAWARKNNSLSMPHPDRRPNKKERRDLLKFKHQDKFE

Sequences:

>Translated_131_residues
MAEKEVRLDKWLWAARFYKTRSIAKAMIESGKVHYNNQRAKVSKIVEVGAMLKLRQGNEEKEIKIIALSDQRRGAPEAQL
LYQETESSVKKREEIAWARKNNSLSMPHPDRRPNKKERRDLLKFKHQDKFE
>Mature_130_residues
AEKEVRLDKWLWAARFYKTRSIAKAMIESGKVHYNNQRAKVSKIVEVGAMLKLRQGNEEKEIKIIALSDQRRGAPEAQLL
YQETESSVKKREEIAWARKNNSLSMPHPDRRPNKKERRDLLKFKHQDKFE

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain

Homologues:

Organism=Escherichia coli, GI1789803, Length=124, Percent_Identity=69.3548387096774, Blast_Score=183, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HSLR_HAEIN (P44754)

Other databases:

- EMBL:   L42023
- PIR:   F64154
- RefSeq:   NP_438719.1
- ProteinModelPortal:   P44754
- SMR:   P44754
- GeneID:   949610
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0562
- TIGR:   HI_0562
- HOGENOM:   HBG586251
- OMA:   IDGGKVH
- ProtClustDB:   CLSK2516586
- BioCyc:   HINF71421:HI_0562-MONOMER
- InterPro:   IPR002942
- SMART:   SM00363

Pfam domain/function: PF01479 S4

EC number: NA

Molecular weight: Translated: 15505; Mature: 15374

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKEVRLDKWLWAARFYKTRSIAKAMIESGKVHYNNQRAKVSKIVEVGAMLKLRQGNEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCC
KEIKIIALSDQRRGAPEAQLLYQETESSVKKREEIAWARKNNSLSMPHPDRRPNKKERRD
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LLKFKHQDKFE
HHHHHCCCCCC
>Mature Secondary Structure 
AEKEVRLDKWLWAARFYKTRSIAKAMIESGKVHYNNQRAKVSKIVEVGAMLKLRQGNEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCC
KEIKIIALSDQRRGAPEAQLLYQETESSVKKREEIAWARKNNSLSMPHPDRRPNKKERRD
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LLKFKHQDKFE
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800