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The map label for this gene is 16272498

Identifier: 16272498

GI number: 16272498

Start: 575203

End: 575745

Strand: Reverse

Name: 16272498

Synonym: HI0554

Alternate gene names: NA

Gene position: 575745-575203 (Counterclockwise)

Preceding gene: 16272499

Following gene: 16272497

Centisome position: 31.46

GC content: 29.83

Gene sequence:

>543_bases
ATGACTACGAAATATAATGCAGGTATTCATCATCGAAGATCGATTCGTTTAAAACATTATAATTATCGTTCTGAAGGATT
TTATTTCATCACCATTTGTTGTAAAAATAAAGAATGTCTATTTGGGCATATCATTAATCAACAAATGCAATTAAATGATT
TAGGGAATTACGTAAAACAGTGTTGGGAAAATATTCCAATGTTCTTTCCACAAGTACGAATTGATGAATTTGTTATTATG
CCAAATCATTTACACGGTATTATTGAAATTATTGAACAGGTAAAGGGCAAATGTAATTTGCCCCTACAATTGAGAGCAAC
ACAGTTGCCACAAAAGGGAACATCTCAAACAATTGGCTCAATAGTTCGTAGATTTAAAGCAGGTGTAACATCTTGGGCAA
GAAAAAATAGTGAAATTTTTGATGTTTGGCAGCGAAATTATTATGAACATATTATTCGTGATGAAAAATCCTATTTGCAG
ATTTATGAATATATTCAAAATAATCCTATTTTATGGGAACAAGATCAATTATATGTAGATTAA

Upstream 100 bases:

>100_bases
GCCTGCAGTGTTGGCAATAGTTTTGCAAATGGTTGCATAAAATTGATCGCTTGTAGGGGAAAATTACATTTGCCCTATAA
AAACAATTACAGCGGAATGT

Downstream 100 bases:

>100_bases
AAGGGCGAATGTAATTCCCTCCTACAATTTATCTATATCATAGACAAACATGTAGGGGCTAATTATATTAGCCCTCATCA
TAAACAAAGATTCAGTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTTKYNAGIHHRRSIRLKHYNYRSEGFYFITICCKNKECLFGHIINQQMQLNDLGNYVKQCWENIPMFFPQVRIDEFVIM
PNHLHGIIEIIEQVKGKCNLPLQLRATQLPQKGTSQTIGSIVRRFKAGVTSWARKNSEIFDVWQRNYYEHIIRDEKSYLQ
IYEYIQNNPILWEQDQLYVD

Sequences:

>Translated_180_residues
MTTKYNAGIHHRRSIRLKHYNYRSEGFYFITICCKNKECLFGHIINQQMQLNDLGNYVKQCWENIPMFFPQVRIDEFVIM
PNHLHGIIEIIEQVKGKCNLPLQLRATQLPQKGTSQTIGSIVRRFKAGVTSWARKNSEIFDVWQRNYYEHIIRDEKSYLQ
IYEYIQNNPILWEQDQLYVD
>Mature_179_residues
TTKYNAGIHHRRSIRLKHYNYRSEGFYFITICCKNKECLFGHIINQQMQLNDLGNYVKQCWENIPMFFPQVRIDEFVIMP
NHLHGIIEIIEQVKGKCNLPLQLRATQLPQKGTSQTIGSIVRRFKAGVTSWARKNSEIFDVWQRNYYEHIIRDEKSYLQI
YEYIQNNPILWEQDQLYVD

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y554_HAEIN (P44014)

Other databases:

- EMBL:   L42023
- PIR:   E64009
- RefSeq:   NP_438712.1
- ProteinModelPortal:   P44014
- GeneID:   949606
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0554
- NMPDR:   fig|71421.1.peg.525
- TIGR:   HI_0554
- HOGENOM:   HBG443161
- OMA:   FITICCK
- ProtClustDB:   CLSK808425
- BioCyc:   HINF71421:HI_0554-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21605; Mature: 21474

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKYNAGIHHRRSIRLKHYNYRSEGFYFITICCKNKECLFGHIINQQMQLNDLGNYVKQ
CCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHH
CWENIPMFFPQVRIDEFVIMPNHLHGIIEIIEQVKGKCNLPLQLRATQLPQKGTSQTIGS
HHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEHHCCCCCCCCHHHHHH
IVRRFKAGVTSWARKNSEIFDVWQRNYYEHIIRDEKSYLQIYEYIQNNPILWEQDQLYVD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCEECC
>Mature Secondary Structure 
TTKYNAGIHHRRSIRLKHYNYRSEGFYFITICCKNKECLFGHIINQQMQLNDLGNYVKQ
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHH
CWENIPMFFPQVRIDEFVIMPNHLHGIIEIIEQVKGKCNLPLQLRATQLPQKGTSQTIGS
HHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEHHCCCCCCCCHHHHHH
IVRRFKAGVTSWARKNSEIFDVWQRNYYEHIIRDEKSYLQIYEYIQNNPILWEQDQLYVD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800