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The map label for this gene is ureC [H]

Identifier: 16272483

GI number: 16272483

Start: 563058

End: 564776

Strand: Reverse

Name: ureC [H]

Synonym: HI0539

Alternate gene names: 16272483

Gene position: 564776-563058 (Counterclockwise)

Preceding gene: 16272484

Following gene: 16272482

Centisome position: 30.86

GC content: 44.15

Gene sequence:

>1719_bases
ATGGCATTAACAATTTCAAGAGCGCAATATGTAGCAACTTATGGTCCAACAGTTGGCGATAAAGTCCGTTTAGGCGATAC
CAATTTATGGGCAACCATTGAACAAGATTTATTGACCAAAGGTGATGAGTGTAAATTTGGTGGCGGTAAAAGCGTGCGTG
ATGGTATGGCTCAAAGCGGTACGGCAACTCGCGACAATCCGAATGTATTGGATTTTGTGATTACCAACGTGATGATCATT
GATGCTAAATTAGGCATTATCAAAGCCGATATTGGTATTCGTGATGGGCGTATTGTGGGTATTGGACAAGCAGGTAACCC
TGACACCATGGATAACGTCACACCAAATATGATTATCGGTGCAAGCACGGAAGTTCATAACGGTGCACATTTAATTGCAA
CCGCTGGTGGTATCGATACCCACATTCACTTTATTTGTCCACAACAAGCACAACATGCAATTGAAAGTGGCGTTACCACG
TTAATTGGTGGTGGAACTGGCCCTGCTGATGGTACACACGCAACCACTTGTACCCCTGGCGCATGGTATATGGAACGTAT
GTTTCAAGCGGCAGAAGCCTTGCCGGTAAACGTCGGATTTTTTGGTAAAGGCAACTGTTCAACCCTAGATCCTCTGCGTG
AGCAAATTGAAGCGGGTGCATTAGGTTTAAAAATCCACGAAGACTGGGGTGCAACGCCTGCCGTGATTGATTCTGCCTTA
AAAGTAGCAGATGAAATGGATATTCAAGTGGCCATTCACACAGACACGCTAAATGAAAGTGGCTTTTTGGAAGACACGAT
GAAAGCGATTGATGGACGAGTCATTCATACTTTCCATACGGAGGGCGCAGGTGGTGGTCATGCACCTGACATCATTAAAG
CAGCGATGTATTCAAACGTATTACCTGCTTCAACCAACCCGACTCGTCCGTTTACCAAAAACACCATTGATGAACATTTG
GATATGTTGATGGTTTGCCATCACTTAGATAAACGCGTGCCGGAAGACGTAGCTTTTGCCGATAGCCGTATCCGCCCTGA
AACCATTGCAGCAGAAGATATTTTGCATGATATGGGCGTCTTCTCCATTATGAGTTCAGACTCTCAAGCGATGGGACGTA
TTGGCGAAGTCGTTATTCGTACATGGCAAACTGCAGATAAGATGAAAATGCAACGTGGTGAGCTAGGTAATGAAGGAAAC
GATAACTTCCGTATTAAACGATATATCGCGAAATACACCATCAACCCAGCAATTGCACATGGTATTGCGGAGCATATTGG
CTCGTTAGAAGTGGGTAAAATCGCAGATATCGTGTTATGGAAACCGATGTTCTTTGGCGTAAAACCTGAAGTGGTGATTA
AAAAAGGCTTTATTAGCTATGCGAAAATGGGCGATCCAAATGCCTCAATTCCAACACCGCAACCTGTATTCTACCGTCCA
ATGTACGGTGCACAAGGCTTAGCAACCGCACAAACAGCAGTATTCTTTGTTTCACAAGCCGCTGAAAAAGCTGATATTCG
TGCGAAGTTCGGTTTACACAAAGAAACCATTGCTGTGAAAGGCTGCCGCAACGTAGGTAAAAAAGATCTGGTTCATAATG
ATGTAACACCAAACATTACTGTTGATGCTGAACGTTATGAAGTTCGAGTGGACGGAGAGTTAATTACCTGTGAACCAGTG
GATAGCGTACCATTGGGTCAGCGATATTTCCTATTCTAA

Upstream 100 bases:

>100_bases
CCGGTGAAGTGAAATCAGTGGAATTAGTTGCTTTTGGTGGTAACCAAATCATTTATGGTTTCCATAATCAAATTGATGGC
AAATTATAAGGTAGGGCAAG

Downstream 100 bases:

>100_bases
AGGACTGTTTTCATAGACGAATTAGTGTAAAAGGGCGTGTACGATACGCCTCTTACTTGATAAATAAGAAATCATTGTAG
CTGTAGTTTTTCTTTCGAAG

Product: urease subunit alpha

Products: NA

Alternate protein names: Urea amidohydrolase subunit alpha [H]

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MALTISRAQYVATYGPTVGDKVRLGDTNLWATIEQDLLTKGDECKFGGGKSVRDGMAQSGTATRDNPNVLDFVITNVMII
DAKLGIIKADIGIRDGRIVGIGQAGNPDTMDNVTPNMIIGASTEVHNGAHLIATAGGIDTHIHFICPQQAQHAIESGVTT
LIGGGTGPADGTHATTCTPGAWYMERMFQAAEALPVNVGFFGKGNCSTLDPLREQIEAGALGLKIHEDWGATPAVIDSAL
KVADEMDIQVAIHTDTLNESGFLEDTMKAIDGRVIHTFHTEGAGGGHAPDIIKAAMYSNVLPASTNPTRPFTKNTIDEHL
DMLMVCHHLDKRVPEDVAFADSRIRPETIAAEDILHDMGVFSIMSSDSQAMGRIGEVVIRTWQTADKMKMQRGELGNEGN
DNFRIKRYIAKYTINPAIAHGIAEHIGSLEVGKIADIVLWKPMFFGVKPEVVIKKGFISYAKMGDPNASIPTPQPVFYRP
MYGAQGLATAQTAVFFVSQAAEKADIRAKFGLHKETIAVKGCRNVGKKDLVHNDVTPNITVDAERYEVRVDGELITCEPV
DSVPLGQRYFLF

Sequences:

>Translated_572_residues
MALTISRAQYVATYGPTVGDKVRLGDTNLWATIEQDLLTKGDECKFGGGKSVRDGMAQSGTATRDNPNVLDFVITNVMII
DAKLGIIKADIGIRDGRIVGIGQAGNPDTMDNVTPNMIIGASTEVHNGAHLIATAGGIDTHIHFICPQQAQHAIESGVTT
LIGGGTGPADGTHATTCTPGAWYMERMFQAAEALPVNVGFFGKGNCSTLDPLREQIEAGALGLKIHEDWGATPAVIDSAL
KVADEMDIQVAIHTDTLNESGFLEDTMKAIDGRVIHTFHTEGAGGGHAPDIIKAAMYSNVLPASTNPTRPFTKNTIDEHL
DMLMVCHHLDKRVPEDVAFADSRIRPETIAAEDILHDMGVFSIMSSDSQAMGRIGEVVIRTWQTADKMKMQRGELGNEGN
DNFRIKRYIAKYTINPAIAHGIAEHIGSLEVGKIADIVLWKPMFFGVKPEVVIKKGFISYAKMGDPNASIPTPQPVFYRP
MYGAQGLATAQTAVFFVSQAAEKADIRAKFGLHKETIAVKGCRNVGKKDLVHNDVTPNITVDAERYEVRVDGELITCEPV
DSVPLGQRYFLF
>Mature_571_residues
ALTISRAQYVATYGPTVGDKVRLGDTNLWATIEQDLLTKGDECKFGGGKSVRDGMAQSGTATRDNPNVLDFVITNVMIID
AKLGIIKADIGIRDGRIVGIGQAGNPDTMDNVTPNMIIGASTEVHNGAHLIATAGGIDTHIHFICPQQAQHAIESGVTTL
IGGGTGPADGTHATTCTPGAWYMERMFQAAEALPVNVGFFGKGNCSTLDPLREQIEAGALGLKIHEDWGATPAVIDSALK
VADEMDIQVAIHTDTLNESGFLEDTMKAIDGRVIHTFHTEGAGGGHAPDIIKAAMYSNVLPASTNPTRPFTKNTIDEHLD
MLMVCHHLDKRVPEDVAFADSRIRPETIAAEDILHDMGVFSIMSSDSQAMGRIGEVVIRTWQTADKMKMQRGELGNEGND
NFRIKRYIAKYTINPAIAHGIAEHIGSLEVGKIADIVLWKPMFFGVKPEVVIKKGFISYAKMGDPNASIPTPQPVFYRPM
YGAQGLATAQTAVFFVSQAAEKADIRAKFGLHKETIAVKGCRNVGKKDLVHNDVTPNITVDAERYEVRVDGELITCEPVD
SVPLGQRYFLF

Specific function: Unknown

COG id: COG0804

COG function: function code E; Urea amidohydrolase (urease) alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 urease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR011612
- InterPro:   IPR005848
- InterPro:   IPR017951
- InterPro:   IPR017950 [H]

Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha [H]

EC number: =3.5.1.5 [H]

Molecular weight: Translated: 61777; Mature: 61646

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS00024 HEMOPEXIN ; PS01120 UREASE_1 ; PS00145 UREASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTISRAQYVATYGPTVGDKVRLGDTNLWATIEQDLLTKGDECKFGGGKSVRDGMAQSG
CEEEECCCEEEEECCCCCCCEEEECCCCEEEEEHHHHHCCCCCCCCCCCCHHHHCHHHCC
TATRDNPNVLDFVITNVMIIDAKLGIIKADIGIRDGRIVGIGQAGNPDTMDNVTPNMIIG
CCCCCCCCHHHHHHHCEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEE
ASTEVHNGAHLIATAGGIDTHIHFICPQQAQHAIESGVTTLIGGGTGPADGTHATTCTPG
CCCCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCH
AWYMERMFQAAEALPVNVGFFGKGNCSTLDPLREQIEAGALGLKIHEDWGATPAVIDSAL
HHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
KVADEMDIQVAIHTDTLNESGFLEDTMKAIDGRVIHTFHTEGAGGGHAPDIIKAAMYSNV
HHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCC
LPASTNPTRPFTKNTIDEHLDMLMVCHHLDKRVPEDVAFADSRIRPETIAAEDILHDMGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
FSIMSSDSQAMGRIGEVVIRTWQTADKMKMQRGELGNEGNDNFRIKRYIAKYTINPAIAH
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCHHHHH
GIAEHIGSLEVGKIADIVLWKPMFFGVKPEVVIKKGFISYAKMGDPNASIPTPQPVFYRP
HHHHHHCCCCHHHHHHHEEECHHHCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCEEECC
MYGAQGLATAQTAVFFVSQAAEKADIRAKFGLHKETIAVKGCRNVGKKDLVHNDVTPNIT
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHEEEHHHHCCCHHHHCCCCCCCCEE
VDAERYEVRVDGELITCEPVDSVPLGQRYFLF
EECCEEEEEECCEEEEECCCCCCCCCCEECCC
>Mature Secondary Structure 
ALTISRAQYVATYGPTVGDKVRLGDTNLWATIEQDLLTKGDECKFGGGKSVRDGMAQSG
EEEECCCEEEEECCCCCCCEEEECCCCEEEEEHHHHHCCCCCCCCCCCCHHHHCHHHCC
TATRDNPNVLDFVITNVMIIDAKLGIIKADIGIRDGRIVGIGQAGNPDTMDNVTPNMIIG
CCCCCCCCHHHHHHHCEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEE
ASTEVHNGAHLIATAGGIDTHIHFICPQQAQHAIESGVTTLIGGGTGPADGTHATTCTPG
CCCCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCH
AWYMERMFQAAEALPVNVGFFGKGNCSTLDPLREQIEAGALGLKIHEDWGATPAVIDSAL
HHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
KVADEMDIQVAIHTDTLNESGFLEDTMKAIDGRVIHTFHTEGAGGGHAPDIIKAAMYSNV
HHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCC
LPASTNPTRPFTKNTIDEHLDMLMVCHHLDKRVPEDVAFADSRIRPETIAAEDILHDMGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
FSIMSSDSQAMGRIGEVVIRTWQTADKMKMQRGELGNEGNDNFRIKRYIAKYTINPAIAH
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCHHHHH
GIAEHIGSLEVGKIADIVLWKPMFFGVKPEVVIKKGFISYAKMGDPNASIPTPQPVFYRP
HHHHHHCCCCHHHHHHHEEECHHHCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCEEECC
MYGAQGLATAQTAVFFVSQAAEKADIRAKFGLHKETIAVKGCRNVGKKDLVHNDVTPNIT
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHEEEHHHHCCCHHHHCCCCCCCCEE
VDAERYEVRVDGELITCEPVDSVPLGQRYFLF
EECCEEEEEECCEEEEECCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA