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The map label for this gene is comA

Identifier: 16272387

GI number: 16272387

Start: 459749

End: 460546

Strand: Reverse

Name: comA

Synonym: HI0439

Alternate gene names: 16272387

Gene position: 460546-459749 (Counterclockwise)

Preceding gene: 16272394

Following gene: 16272386

Centisome position: 25.16

GC content: 35.59

Gene sequence:

>798_bases
ATGCAATTCTCCCTGAAAAATTACCGCACTTTACAAATCGGCATTCATCGTAAGCAGAGTTATTTTGATTTTGTGTGGTT
TGATGATCTCGAACAGCCACAAAGTTATCAAATCTTTGTTAATGATCGTTATTTTAAAAATCGTTTTTTACAACAGCTAA
AAACACAATATCAAGGGAAAACCTTTCCTTTGCAGTTTGTAGCAAGCATTCCCGCCCACTTAACTTGGTCGAAAGTATTA
ATGTTGCCACAAGTGTTAAATGCGCAAGAATGTCATCAACAATGTAAATTTGTGATTGAAAAAGAGCTGCCTATTTTTTT
AGAAGAATTGTGGTTTGATTATCGTTCTACCCCGTTAAAGCAAGGTTTTCGATTAGAGGTTACTGCAATTCGTAAAAGTA
GCGCTCAAACTTATTTGCAAGATTTTCAGCCATTTAATATTAATATATTGGATGTTGCGTCAAATGCTGTTTTGCGTGCA
TTTCAATATCTGTTGAATGAACAAGTGCGGTCAGAAAATACCTTATTTTTATTTCAAGAAGATGACTATTGCTTGGCGAT
TTGTGAAAGATCTCAGCAATCACAAATTTTACAATCTCACGAAAATTTGACCGCACTTTATGAACAATTTACCGAACGTT
TTGAAGGACAACTTGAACAAGTTTTTGTTTATCAAATTCCCTCAAGTCATACACCATTACCCGAAAACTGGCAGCGAGTA
GAAACAGAACTCCCTTTTATTGCGCTGGGCAACGCGCTATGGCAAAAAGATTTACATCAACAAAAAGTGGGTGGTTAA

Upstream 100 bases:

>100_bases
ATCGTAAAATTCTCGCTTCGTTAATGAATATTCTTGTCAAGAGACCTATGATTTGGCTGTTAAGTATAAAAGATTCAGCC
TTTAAAGAATAGGAAAGAAT

Downstream 100 bases:

>100_bases
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATT

Product: competence protein A

Products: NA

Alternate protein names: DNA transformation protein ComA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MQFSLKNYRTLQIGIHRKQSYFDFVWFDDLEQPQSYQIFVNDRYFKNRFLQQLKTQYQGKTFPLQFVASIPAHLTWSKVL
MLPQVLNAQECHQQCKFVIEKELPIFLEELWFDYRSTPLKQGFRLEVTAIRKSSAQTYLQDFQPFNINILDVASNAVLRA
FQYLLNEQVRSENTLFLFQEDDYCLAICERSQQSQILQSHENLTALYEQFTERFEGQLEQVFVYQIPSSHTPLPENWQRV
ETELPFIALGNALWQKDLHQQKVGG

Sequences:

>Translated_265_residues
MQFSLKNYRTLQIGIHRKQSYFDFVWFDDLEQPQSYQIFVNDRYFKNRFLQQLKTQYQGKTFPLQFVASIPAHLTWSKVL
MLPQVLNAQECHQQCKFVIEKELPIFLEELWFDYRSTPLKQGFRLEVTAIRKSSAQTYLQDFQPFNINILDVASNAVLRA
FQYLLNEQVRSENTLFLFQEDDYCLAICERSQQSQILQSHENLTALYEQFTERFEGQLEQVFVYQIPSSHTPLPENWQRV
ETELPFIALGNALWQKDLHQQKVGG
>Mature_265_residues
MQFSLKNYRTLQIGIHRKQSYFDFVWFDDLEQPQSYQIFVNDRYFKNRFLQQLKTQYQGKTFPLQFVASIPAHLTWSKVL
MLPQVLNAQECHQQCKFVIEKELPIFLEELWFDYRSTPLKQGFRLEVTAIRKSSAQTYLQDFQPFNINILDVASNAVLRA
FQYLLNEQVRSENTLFLFQEDDYCLAICERSQQSQILQSHENLTALYEQFTERFEGQLEQVFVYQIPSSHTPLPENWQRV
ETELPFIALGNALWQKDLHQQKVGG

Specific function: Involved in transformation (competence for DNA uptake)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMA_HAEIN (P31768)

Other databases:

- EMBL:   M62809
- EMBL:   L42023
- PIR:   C64068
- RefSeq:   NP_438600.1
- GeneID:   949534
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0439
- NMPDR:   fig|71421.1.peg.413
- TIGR:   HI_0439
- HOGENOM:   HBG297219
- OMA:   LQIGIHR
- ProtClustDB:   CLSK870408
- BioCyc:   HINF71421:HI_0439-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31542; Mature: 31542

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFSLKNYRTLQIGIHRKQSYFDFVWFDDLEQPQSYQIFVNDRYFKNRFLQQLKTQYQGK
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
TFPLQFVASIPAHLTWSKVLMLPQVLNAQECHQQCKFVIEKELPIFLEELWFDYRSTPLK
CCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
QGFRLEVTAIRKSSAQTYLQDFQPFNINILDVASNAVLRAFQYLLNEQVRSENTLFLFQE
CCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
DDYCLAICERSQQSQILQSHENLTALYEQFTERFEGQLEQVFVYQIPSSHTPLPENWQRV
CCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHHHH
ETELPFIALGNALWQKDLHQQKVGG
HHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFSLKNYRTLQIGIHRKQSYFDFVWFDDLEQPQSYQIFVNDRYFKNRFLQQLKTQYQGK
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
TFPLQFVASIPAHLTWSKVLMLPQVLNAQECHQQCKFVIEKELPIFLEELWFDYRSTPLK
CCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
QGFRLEVTAIRKSSAQTYLQDFQPFNINILDVASNAVLRAFQYLLNEQVRSENTLFLFQE
CCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
DDYCLAICERSQQSQILQSHENLTALYEQFTERFEGQLEQVFVYQIPSSHTPLPENWQRV
CCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHHHH
ETELPFIALGNALWQKDLHQQKVGG
HHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800