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The map label for this gene is dsbB [H]

Identifier: 16272376

GI number: 16272376

Start: 451167

End: 451700

Strand: Direct

Name: dsbB [H]

Synonym: HI0428

Alternate gene names: 16272376

Gene position: 451167-451700 (Clockwise)

Preceding gene: 30995374

Following gene: 16272388

Centisome position: 24.65

GC content: 35.58

Gene sequence:

>534_bases
ATGCTCGCGCTATTAAAACAATTTTCTGAAAAACGTTTTGTGTGGTTTTTATTGGCTTTTTCAAGTTTAGCCTTAGAATC
CACCGCACTTTACTTCCAATATGGAATGGGCTTACAACCTTGTGTGCTCTGTGTTTATGAACGTTTAGCAATGATTGGCT
TATTTGTAGCGGGCACTATCGCATTACTTCAACCTCGCGTTTTCATACTTCGATTAATCGCCTTGGCTTTAGGTTTATTC
AGCAGTATTAAGGGCTTATTAATTTCATTTCGTCATCTTGATTTGCAAATGAATCCAGCTCCTTGGAAACAATGTGAGTT
TATTCCAAATTTTCCCGAGACTTTACCATTTCATCAATGGTTTCCATTTATATTTAACCCAACTGGCTCTTGTAATGAAA
GCCAATGGTCATTATTTGGTTTAACGATGGTGCAATGGCTAGTGGTTATTTTTTCACTATATGTGGTTATTCTCACATTA
TTGTTAATCGCACAAGTGATTAAAACACGGAAACAAAGAAGATTATTTAACTAA

Upstream 100 bases:

>100_bases
ACTTTCAATCATTGGTTTACTGGCTATTGAATTTATTTTACCAGCTGCCACAATTTGGTTAGCAAGTTTAGGTTTAATTT
TGCCAATTTAAGGAGAAAAA

Downstream 100 bases:

>100_bases
AAAATACGGTGAAATTTCACCGTATTTTTTATTACATTAAAATCAACCGCACTTTATTCAACGGTAACTGATTTTGCTAA
GTTACGAGGTTGATCTACAT

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase [H]

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLALLKQFSEKRFVWFLLAFSSLALESTALYFQYGMGLQPCVLCVYERLAMIGLFVAGTIALLQPRVFILRLIALALGLF
SSIKGLLISFRHLDLQMNPAPWKQCEFIPNFPETLPFHQWFPFIFNPTGSCNESQWSLFGLTMVQWLVVIFSLYVVILTL
LLIAQVIKTRKQRRLFN

Sequences:

>Translated_177_residues
MLALLKQFSEKRFVWFLLAFSSLALESTALYFQYGMGLQPCVLCVYERLAMIGLFVAGTIALLQPRVFILRLIALALGLF
SSIKGLLISFRHLDLQMNPAPWKQCEFIPNFPETLPFHQWFPFIFNPTGSCNESQWSLFGLTMVQWLVVIFSLYVVILTL
LLIAQVIKTRKQRRLFN
>Mature_177_residues
MLALLKQFSEKRFVWFLLAFSSLALESTALYFQYGMGLQPCVLCVYERLAMIGLFVAGTIALLQPRVFILRLIALALGLF
SSIKGLLISFRHLDLQMNPAPWKQCEFIPNFPETLPFHQWFPFIFNPTGSCNESQWSLFGLTMVQWLVVIFSLYVVILTL
LLIAQVIKTRKQRRLFN

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family [H]

Homologues:

Organism=Escherichia coli, GI1787433, Length=177, Percent_Identity=43.5028248587571, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752
- InterPro:   IPR022920 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 20443; Mature: 20443

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALLKQFSEKRFVWFLLAFSSLALESTALYFQYGMGLQPCVLCVYERLAMIGLFVAGTI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ALLQPRVFILRLIALALGLFSSIKGLLISFRHLDLQMNPAPWKQCEFIPNFPETLPFHQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHCCCCCCCCCCCCHHHC
FPFIFNPTGSCNESQWSLFGLTMVQWLVVIFSLYVVILTLLLIAQVIKTRKQRRLFN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLALLKQFSEKRFVWFLLAFSSLALESTALYFQYGMGLQPCVLCVYERLAMIGLFVAGTI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ALLQPRVFILRLIALALGLFSSIKGLLISFRHLDLQMNPAPWKQCEFIPNFPETLPFHQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHCCCCCCCCCCCCHHHC
FPFIFNPTGSCNESQWSLFGLTMVQWLVVIFSLYVVILTLLLIAQVIKTRKQRRLFN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA