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The map label for this gene is ybgC [C]

Identifier: 16272334

GI number: 16272334

Start: 406265

End: 406675

Strand: Reverse

Name: ybgC [C]

Synonym: HI0386

Alternate gene names: 16272334

Gene position: 406675-406265 (Counterclockwise)

Preceding gene: 30995371

Following gene: 16272333

Centisome position: 22.22

GC content: 39.9

Gene sequence:

>411_bases
ATGTTGGATAATGGCTTTTCTTTTCCTGTTCGTGTGTATTATGAAGATACTGATGCAGGTGGCGTAGTGTATCACGCTCG
CTATTTGCATTTTTTTGAACGAGCAAGAACAGAATATTTGCGTACATTAAATTTTACGCAACAAACCTTACTAGAGGAAC
AACAACTCGCATTTGTTGTCAAAACGCTCGCCATTGATTATTGCGTGGCAGCAAAATTGGATGATTTACTTATGGTGGAA
ACAGAGGTTTCAGAAGTAAAAGGGGCTACAATCCTTTTTGAACAGAGACTGATGCGCAACACCCTGATGTTATCAAAGGC
TACTGTTAAGGTAGCCTGTGTTGATCTAGGCAAGATGAAACCAGTGGCGTTTCCCAAAGAAGTTAAAGCGGCGTTTCATC
ACTTAAAATAA

Upstream 100 bases:

>100_bases
TAAAATGAATAAAATCTTATTGAGTTTTTCATAGATAGCTTGCTTATCCCAAAAACTGGTTCTAGAATACACGGTTTATT
GCGACCAATTGGGTGAGAAT

Downstream 100 bases:

>100_bases
TTTTTCGGAGTATGCAATGACTGCAGAATTGAATTTTTTAGATCTTTTTCTAAAAGCAAGTATTGTTGTGCAACTGGTAA
TTGTGATTTTGATTTCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLDNGFSFPVRVYYEDTDAGGVVYHARYLHFFERARTEYLRTLNFTQQTLLEEQQLAFVVKTLAIDYCVAAKLDDLLMVE
TEVSEVKGATILFEQRLMRNTLMLSKATVKVACVDLGKMKPVAFPKEVKAAFHHLK

Sequences:

>Translated_136_residues
MLDNGFSFPVRVYYEDTDAGGVVYHARYLHFFERARTEYLRTLNFTQQTLLEEQQLAFVVKTLAIDYCVAAKLDDLLMVE
TEVSEVKGATILFEQRLMRNTLMLSKATVKVACVDLGKMKPVAFPKEVKAAFHHLK
>Mature_136_residues
MLDNGFSFPVRVYYEDTDAGGVVYHARYLHFFERARTEYLRTLNFTQQTLLEEQQLAFVVKTLAIDYCVAAKLDDLLMVE
TEVSEVKGATILFEQRLMRNTLMLSKATVKVACVDLGKMKPVAFPKEVKAAFHHLK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family

Homologues:

Organism=Escherichia coli, GI1786957, Length=129, Percent_Identity=53.4883720930233, Blast_Score=139, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y386_HAEIN (P44679)

Other databases:

- EMBL:   L42023
- PIR:   H64150
- RefSeq:   NP_438547.1
- ProteinModelPortal:   P44679
- SMR:   P44679
- GeneID:   950554
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0386
- TIGR:   HI_0386
- HOGENOM:   HBG731751
- OMA:   RVGCVDR
- ProtClustDB:   CLSK870315
- BioCyc:   HINF71421:HI_0386-MONOMER
- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166
- TIGRFAMs:   TIGR00051
- TIGRFAMs:   TIGR02799

Pfam domain/function: PF03061 4HBT

EC number: NA

Molecular weight: Translated: 15597; Mature: 15597

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: ACT_SITE 18-18

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNGFSFPVRVYYEDTDAGGVVYHARYLHFFERARTEYLRTLNFTQQTLLEEQQLAFVV
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
KTLAIDYCVAAKLDDLLMVETEVSEVKGATILFEQRLMRNTLMLSKATVKVACVDLGKMK
HHHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
PVAFPKEVKAAFHHLK
CCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLDNGFSFPVRVYYEDTDAGGVVYHARYLHFFERARTEYLRTLNFTQQTLLEEQQLAFVV
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
KTLAIDYCVAAKLDDLLMVETEVSEVKGATILFEQRLMRNTLMLSKATVKVACVDLGKMK
HHHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
PVAFPKEVKAAFHHLK
CCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800