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The map label for this gene is oapA

Identifier: 16272282

GI number: 16272282

Start: 357367

End: 358662

Strand: Direct

Name: oapA

Synonym: HI0330

Alternate gene names: 16272282

Gene position: 357367-358662 (Clockwise)

Preceding gene: 16272281

Following gene: 16272283

Centisome position: 19.53

GC content: 39.12

Gene sequence:

>1296_bases
GTGAATTCTATGGATAAAAATCAACAATCATCTCAAAATGAATTGGATTTAGGGCTTAATCAAGAGCCAATTACACCAAA
GAAAACAATTCAGCCAAGTTCGTCAATTTTAGGTAAAGCAAAAGGGTTATTTGCCAAAAAAAATCACGTGCAAACTAACT
TTCAGCAACGTAAAGAACCTACTTTTGGCGATTCATCAACGCAAGAAAATGATCCTTTAATTCCGAGTGAAAATTTGAAA
AAAGTGCAAAAGCCTGTTCTTCAAACTTCTTCCACAGAAGAAAATATTTCTGCGGTTGATGAAGAAATCAGTGCTGAAAA
TAACGCGGATGAACCCGTCGAAAAGGCTGAAAAACCTATTTTAGCTCAACCAGAAAAATGGAAAATATTACAAGTATTGC
CAGCAAAACATCGCCGTTTATTTATGGCTATTTTTGTGTTGGTTATTTTATTGATTATTTTCTTCGCATTAAAACCAAGT
TCTGACACCGTTGAGTCTTTTACTCAATCTAACAGCAATGAAGTTCCTGTGCAGTTCCAATCGTTAGATCAAAGTCAGCC
ACTGGAAACCACGATTTTAGATAATCCTCCTGCACAAAATCAAATGGCTGTAGAACAAGCTAACCAATCTGAATTTGCAC
CAAAAGCAGAGGAAGCGGCGAATAATACGACGGCTCAAAACCCATTAGTAGAAAATGCGCCAATGCAACAAAATGTTGTT
CAATCTCCAAGTCAAATGCCAAATGAAATGGCTGCGGCATCTGTTGCGCCTATGCAACCAGCTCAAGCGGAACAGCCAAA
AGCAACTGTGCCAGTTCAGCCGATGAAAAAAGCGGTAGAGCCACAAGTTGCGCATAAAGATACAGTGAAAAAAGAAGTGA
AAGTGGCGGAGAAAGCACAGGCTCCAGCAAAAGCAACGGAACAAAACGTCGCTAAAACAGCAGGAAACGCACCGATTGTT
GAAGCCAAACCTGTTCAAGCTAAAAAAGAAAAGAAAGTTCAAATCGTTGATGCAAAACCTGTGAGTAAATCTACAGCTTC
TCGCCTTTCAGCAAAAACATTAACTGTGCCGAAAGGTGTTTCGCTGATGCAACTCTTCCGTGATAATCAACTTAATATTT
CCGATGTAAACGCAATGAGCAAAGCGACAGGGGCGGGAAATGTTTTAAGTAGCTTTAAATCTGGCGATAAAGTAACGGTA
TCTGTGAATAATCAAGGGCGAGTAAATGAAATGCGTTTATCCAATGGTGCGCGTTTTGTGCGTCAGTCTGATGGTTCTTA
TCAATATAAAAAATAA

Upstream 100 bases:

>100_bases
AAGATCCGATAAAATACACATAATTTTTTCGCCGCACTTTTGAGCTTCTCAATTTTGTGGCTAATTAATATAAATAAGAA
CAAGCATCAGAGGCAATCCA

Downstream 100 bases:

>100_bases
TTTTTTGGGCGAGTAATCGCCCCTTTTTCTTTTTAAGTTCTTTTCTCAAGGTAGGATTTATGTTGAAAAAAACATCTCTT
ATTTTTACCGCACTTTTAAT

Product: opacity associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MNSMDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFGDSSTQENDPLIPSENLK
KVQKPVLQTSSTEENISAVDEEISAENNADEPVEKAEKPILAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPS
SDTVESFTQSNSNEVPVQFQSLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVV
QSPSQMPNEMAAASVAPMQPAQAEQPKATVPVQPMKKAVEPQVAHKDTVKKEVKVAEKAQAPAKATEQNVAKTAGNAPIV
EAKPVQAKKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLMQLFRDNQLNISDVNAMSKATGAGNVLSSFKSGDKVTV
SVNNQGRVNEMRLSNGARFVRQSDGSYQYKK

Sequences:

>Translated_431_residues
MNSMDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFGDSSTQENDPLIPSENLK
KVQKPVLQTSSTEENISAVDEEISAENNADEPVEKAEKPILAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPS
SDTVESFTQSNSNEVPVQFQSLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVV
QSPSQMPNEMAAASVAPMQPAQAEQPKATVPVQPMKKAVEPQVAHKDTVKKEVKVAEKAQAPAKATEQNVAKTAGNAPIV
EAKPVQAKKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLMQLFRDNQLNISDVNAMSKATGAGNVLSSFKSGDKVTV
SVNNQGRVNEMRLSNGARFVRQSDGSYQYKK
>Mature_431_residues
MNSMDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFGDSSTQENDPLIPSENLK
KVQKPVLQTSSTEENISAVDEEISAENNADEPVEKAEKPILAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPS
SDTVESFTQSNSNEVPVQFQSLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVV
QSPSQMPNEMAAASVAPMQPAQAEQPKATVPVQPMKKAVEPQVAHKDTVKKEVKVAEKAQAPAKATEQNVAKTAGNAPIV
EAKPVQAKKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLMQLFRDNQLNISDVNAMSKATGAGNVLSSFKSGDKVTV
SVNNQGRVNEMRLSNGARFVRQSDGSYQYKK

Specific function: Cell envelope protein involved in phase variation

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Secreted

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OAPA_HAEIN (P44415)

Other databases:

- EMBL:   U17037
- EMBL:   L42023
- PIR:   A64062
- RefSeq:   NP_438494.1
- GeneID:   949442
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0330
- NMPDR:   fig|71421.1.peg.309
- TIGR:   HI_0330
- HOGENOM:   HBG297166
- OMA:   ENISAVD
- ProtClustDB:   CLSK869964
- BioCyc:   HINF71421:HI_0330-MONOMER
- InterPro:   IPR013731
- InterPro:   IPR007340

Pfam domain/function: PF04225 OapA; PF08525 OapA_N

EC number: NA

Molecular weight: Translated: 47010; Mature: 47010

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEP
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TFGDSSTQENDPLIPSENLKKVQKPVLQTSSTEENISAVDEEISAENNADEPVEKAEKPI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCC
LAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPSSDTVESFTQSNSNEVPVQFQ
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEHC
SLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVV
CCCCCCCCCEEECCCCCCCCHHHHHHCCHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHH
QSPSQMPNEMAAASVAPMQPAQAEQPKATVPVQPMKKAVEPQVAHKDTVKKEVKVAEKAQ
CCHHHCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
APAKATEQNVAKTAGNAPIVEAKPVQAKKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGV
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHEECCCCCH
SLMQLFRDNQLNISDVNAMSKATGAGNVLSSFKSGDKVTVSVNNQGRVNEMRLSNGARFV
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCHHHH
RQSDGSYQYKK
CCCCCCCCCCC
>Mature Secondary Structure
MNSMDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEP
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TFGDSSTQENDPLIPSENLKKVQKPVLQTSSTEENISAVDEEISAENNADEPVEKAEKPI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCC
LAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPSSDTVESFTQSNSNEVPVQFQ
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEHC
SLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVV
CCCCCCCCCEEECCCCCCCCHHHHHHCCHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHH
QSPSQMPNEMAAASVAPMQPAQAEQPKATVPVQPMKKAVEPQVAHKDTVKKEVKVAEKAQ
CCHHHCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
APAKATEQNVAKTAGNAPIVEAKPVQAKKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGV
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHEECCCCCH
SLMQLFRDNQLNISDVNAMSKATGAGNVLSSFKSGDKVTVSVNNQGRVNEMRLSNGARFV
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCHHHH
RQSDGSYQYKK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8559074; 7542800