| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16272272
Identifier: 16272272
GI number: 16272272
Start: 349748
End: 350266
Strand: Direct
Name: 16272272
Synonym: HI0318
Alternate gene names: NA
Gene position: 349748-350266 (Clockwise)
Preceding gene: 16272265
Following gene: 16272273
Centisome position: 19.11
GC content: 33.33
Gene sequence:
>519_bases ATGTTATTTATCAATATTACTTTTGCCTGTATTTTAGCGATCCGTTTTTACAGTCTGTCTATTTCAATTCGTCATGAAAA AGCACTCATTGCAAAGGGTGCAATACAGTATGGTAAACGCAATTCCACACTGTTGTCCATTGCCCATGTTGCATTTTATT TTGCGGCGATCATTGAGGCTAATAAGCAAAACCTGTCATTTAATAGCACTTCACAAATAGGGTTGGCGATTTTAATTTTT GCTATTGCAATGCTATTTTATGTGATTTATGAGCTAAAAGAGATTTGGACAGTAAAAATTTATATTTTACCAGAACATCA AATTAATCGATCTTTCTTGTTTAAATACGTACGTCACCCAAATTATTTCTTAAACATTATTCCCGAATTAATTGGTTTAT CGCTTTTCTGTCAGGCTAAATATACCGCATTGGTTGGACTACCTATTTATTTGCTTATCTTAGCCGTGCGTATTAAACAA GAAGAGAGTGCCATGTCGCATTTATTTCCTAAATCATAA
Upstream 100 bases:
>100_bases GTAATAAATATTCAAAATAAAGGCTTTTTTGTGCCATATCATCAGATTTTTTGTTATATTATGCCGCTTGTTGAGATTAA ATTACGTTAAGGATAACCAC
Downstream 100 bases:
>100_bases TTTATAAATTTCTTCTAAAAGAACGACTCTTTCTCTCTGCCTTTAACACATTATGGTAAAAGATACTCTATTTTCTACCC CCATTGCTAAATTGGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLFINITFACILAIRFYSLSISIRHEKALIAKGAIQYGKRNSTLLSIAHVAFYFAAIIEANKQNLSFNSTSQIGLAILIF AIAMLFYVIYELKEIWTVKIYILPEHQINRSFLFKYVRHPNYFLNIIPELIGLSLFCQAKYTALVGLPIYLLILAVRIKQ EESAMSHLFPKS
Sequences:
>Translated_172_residues MLFINITFACILAIRFYSLSISIRHEKALIAKGAIQYGKRNSTLLSIAHVAFYFAAIIEANKQNLSFNSTSQIGLAILIF AIAMLFYVIYELKEIWTVKIYILPEHQINRSFLFKYVRHPNYFLNIIPELIGLSLFCQAKYTALVGLPIYLLILAVRIKQ EESAMSHLFPKS >Mature_172_residues MLFINITFACILAIRFYSLSISIRHEKALIAKGAIQYGKRNSTLLSIAHVAFYFAAIIEANKQNLSFNSTSQIGLAILIF AIAMLFYVIYELKEIWTVKIYILPEHQINRSFLFKYVRHPNYFLNIIPELIGLSLFCQAKYTALVGLPIYLLILAVRIKQ EESAMSHLFPKS
Specific function: Unknown
COG id: COG1755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y318_HAEIN (P43984)
Other databases:
- EMBL: L42023 - PIR: B64006 - RefSeq: NP_438484.1 - GeneID: 949431 - GenomeReviews: L42023_GR - KEGG: hin:HI0318 - TIGR: HI_0318 - HOGENOM: HBG296644 - OMA: PNYFLNV - ProtClustDB: CLSK870320 - BioCyc: HINF71421:HI_0318-MONOMER - InterPro: IPR007269
Pfam domain/function: PF04140 ICMT
EC number: NA
Molecular weight: Translated: 19725; Mature: 19725
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x405b8fb0)-; HASH(0xc9c0bb0)-; HASH(0xb2730d4)-; HASH(0xc0de818)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFINITFACILAIRFYSLSISIRHEKALIAKGAIQYGKRNSTLLSIAHVAFYFAAIIEA CEEEEHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC NKQNLSFNSTSQIGLAILIFAIAMLFYVIYELKEIWTVKIYILPEHQINRSFLFKYVRHP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHCC NYFLNIIPELIGLSLFCQAKYTALVGLPIYLLILAVRIKQEESAMSHLFPKS CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure MLFINITFACILAIRFYSLSISIRHEKALIAKGAIQYGKRNSTLLSIAHVAFYFAAIIEA CEEEEHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC NKQNLSFNSTSQIGLAILIFAIAMLFYVIYELKEIWTVKIYILPEHQINRSFLFKYVRHP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHCC NYFLNIIPELIGLSLFCQAKYTALVGLPIYLLILAVRIKQEESAMSHLFPKS CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800