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The map label for this gene is opsX

Identifier: 16272219

GI number: 16272219

Start: 290912

End: 291955

Strand: Direct

Name: opsX

Synonym: HI0261

Alternate gene names: 16272219

Gene position: 290912-291955 (Clockwise)

Preceding gene: 16272215

Following gene: 16272220

Centisome position: 15.9

GC content: 38.12

Gene sequence:

>1044_bases
ATGCCACTTTTTACCGAAGCTCCAAAATCCCTTTGTATTCTCCGATTGTCAGCGGTAGGCGATGTCTGTCATGCCTTAGC
GGTGGTTCAGCACATTCAAGAATATTATCCCCAAACAGAAATGACTTGGATTGTAGGAAAAACCGAAATGGGTTTGCTTT
CAAGTATTCCTAATATCACGCTTATTCCTTACGATAAAAAAACAGGATGGAAAGGCGTTTTATCACTTTGGAAACAACTA
AAAAATAAACAGTTTGATGCGCTATTAAATATGCAAACAGCATTTCGTGCATCAATCCTTTCTTTAGGAATTAAAGCAAA
ATTCAAAATTGGATTTGGAGAAAAACGTTCTCGCGAAGGGCAATGGCTATTTGTAAATCGTCGCATCAGAGATCCTTTTT
CCCCTCACGTATTAGATGGATTTATGGCTTTCGCTGAATATATTGGCGTGCCGAAAGCAGAACCGAAATGGGAATTAGCT
ATCTCACAAGATGATTATAAATTTGCCGATCAATTTATTGATTTCTCTCGTAAAAATTTATTAATTTCCCCTTGTTCTAG
CAAAGCAGAAAAAGATTGGCTAATCGAAGGTTATGCAGAGGTTGCCAATATTGCCCATCAGCATAATATCAATGTAATCT
TCTGCAGTTCACCAGCCAAACGTGAATTAGAAATAGTCGAAAAAATTACCGCACTTTGCCATTTCACACCAACCAATATT
GCAGGGAAAACAAACCTAAAACAGCTTACCGCTTTAATTTCTAAGGTTGATCTAGTACTTTCGCCAGATTCAGGCCCTGC
CCATATAGCGACAACACAAGGTACACCCGTTATTGGCTTGTATGCCTATCACAATCCTTTGCGTACTGCACCTTATAATA
ATTTAGATAACGTGGTATCAGTATATGAAGAAAATGCCCAAAAAGAATTTGGCAAACCGTCATCTGAACTACCTTGGGCA
ACGAAACTAAAAGGGAAAAATTTGATGACAGAGATTCAAGTGGAACCCGTCATTGGACAAATGAAAAAATTGGGGTTATT
TTGA

Upstream 100 bases:

>100_bases
GTTATCTTGTTGGAATTGGTGCATTGGAACGTTGTTATGAATAGAAAATGGACTTATTCTACTTTAAAATAAGCACAAAT
TAAATGATAAAGGAACGTCA

Downstream 100 bases:

>100_bases
AAAAATAATCTGTATCTCAAAACTTAGATGGTTTTAATATAGCCAACTTGAAAGTTGTTTTTGGAAAGTAAGGACTTTAG
TTTTTTTAAGTTAAAAATCA

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPLFTEAPKSLCILRLSAVGDVCHALAVVQHIQEYYPQTEMTWIVGKTEMGLLSSIPNITLIPYDKKTGWKGVLSLWKQL
KNKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREGQWLFVNRRIRDPFSPHVLDGFMAFAEYIGVPKAEPKWELA
ISQDDYKFADQFIDFSRKNLLISPCSSKAEKDWLIEGYAEVANIAHQHNINVIFCSSPAKRELEIVEKITALCHFTPTNI
AGKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYNNLDNVVSVYEENAQKEFGKPSSELPWA
TKLKGKNLMTEIQVEPVIGQMKKLGLF

Sequences:

>Translated_347_residues
MPLFTEAPKSLCILRLSAVGDVCHALAVVQHIQEYYPQTEMTWIVGKTEMGLLSSIPNITLIPYDKKTGWKGVLSLWKQL
KNKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREGQWLFVNRRIRDPFSPHVLDGFMAFAEYIGVPKAEPKWELA
ISQDDYKFADQFIDFSRKNLLISPCSSKAEKDWLIEGYAEVANIAHQHNINVIFCSSPAKRELEIVEKITALCHFTPTNI
AGKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYNNLDNVVSVYEENAQKEFGKPSSELPWA
TKLKGKNLMTEIQVEPVIGQMKKLGLF
>Mature_346_residues
PLFTEAPKSLCILRLSAVGDVCHALAVVQHIQEYYPQTEMTWIVGKTEMGLLSSIPNITLIPYDKKTGWKGVLSLWKQLK
NKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREGQWLFVNRRIRDPFSPHVLDGFMAFAEYIGVPKAEPKWELAI
SQDDYKFADQFIDFSRKNLLISPCSSKAEKDWLIEGYAEVANIAHQHNINVIFCSSPAKRELEIVEKITALCHFTPTNIA
GKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYNNLDNVVSVYEENAQKEFGKPSSELPWAT
KLKGKNLMTEIQVEPVIGQMKKLGLF

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family

Homologues:

Organism=Escherichia coli, GI1790062, Length=339, Percent_Identity=23.598820058997, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y261_HAEIN (Q57336)

Other databases:

- EMBL:   L42023
- PIR:   B64058
- RefSeq:   NP_438430.1
- ProteinModelPortal:   Q57336
- GeneID:   950896
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0261
- NMPDR:   fig|71421.1.peg.246
- TIGR:   HI_0261
- HOGENOM:   HBG296723
- OMA:   IICAAAS
- ProtClustDB:   CLSK2459779
- BioCyc:   HINF71421:HI_0261-MONOMER
- InterPro:   IPR002201

Pfam domain/function: PF01075 Glyco_transf_9

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38939; Mature: 38807

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFTEAPKSLCILRLSAVGDVCHALAVVQHIQEYYPQTEMTWIVGKTEMGLLSSIPNIT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCE
LIPYDKKTGWKGVLSLWKQLKNKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREG
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
QWLFVNRRIRDPFSPHVLDGFMAFAEYIGVPKAEPKWELAISQDDYKFADQFIDFSRKNL
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
LISPCSSKAEKDWLIEGYAEVANIAHQHNINVIFCSSPAKRELEIVEKITALCHFTPTNI
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
AGKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYNNLDNVVS
CCCCCHHHHHHHHHHHCEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHH
VYEENAQKEFGKPSSELPWATKLKGKNLMTEIQVEPVIGQMKKLGLF
HHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEECHHHHHHHHHCCC
>Mature Secondary Structure 
PLFTEAPKSLCILRLSAVGDVCHALAVVQHIQEYYPQTEMTWIVGKTEMGLLSSIPNIT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCE
LIPYDKKTGWKGVLSLWKQLKNKQFDALLNMQTAFRASILSLGIKAKFKIGFGEKRSREG
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
QWLFVNRRIRDPFSPHVLDGFMAFAEYIGVPKAEPKWELAISQDDYKFADQFIDFSRKNL
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
LISPCSSKAEKDWLIEGYAEVANIAHQHNINVIFCSSPAKRELEIVEKITALCHFTPTNI
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
AGKTNLKQLTALISKVDLVLSPDSGPAHIATTQGTPVIGLYAYHNPLRTAPYNNLDNVVS
CCCCCHHHHHHHHHHHCEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHH
VYEENAQKEFGKPSSELPWATKLKGKNLMTEIQVEPVIGQMKKLGLF
HHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800