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The map label for this gene is nlpB [C]

Identifier: 16272214

GI number: 16272214

Start: 286573

End: 287220

Strand: Direct

Name: nlpB [C]

Synonym: HI0256

Alternate gene names: 16272214

Gene position: 286573-287220 (Clockwise)

Preceding gene: 16272213

Following gene: 16272215

Centisome position: 15.66

GC content: 34.41

Gene sequence:

>648_bases
ATGAAAAAAATAATATTGAATTTAGTAACGGCTATTATTCTAGCTGGTTGTTCGTCTAATCCTGAAACCTTAAAAGCAAC
CAACGACTCATTTCAAAAATCTGAGACGAGCATTCCCCATTTTTCCCCTTTGGCTACTGGAGGGGTACAGTTACCAAAAG
CTGATGATTCCTATTCATTACCTAATATTGAAGTGAAAAAAGGGGAAGATATTGATATTCGCCCACCATTAATCCCTCTC
GCTATTATTCAAAATTCAATAACAAAATTTGATGGCGAACGCTCGTTGATTGTCTATCCAAAACAACAGGCAAAACTATA
TAATCTTCAGCAAGTTGAGCGTTTATTGAAAGAAGAGGGTATTTCATCAACAACAGATGGTTCGATTTTAACGACTGATT
GGGCAAAAACAGAACGAATTGGCGATAAATCTATAGAAATAAAATATCAAATAGAACAAGTTATGACAGCTGATGTAAGT
GCGCTTACCGTATCTATTTTACATATGCGCCGAGATGGTATTATTTTTACACCAAATGTATCAGATAAACAATATTATAC
TTCGGAACGTTTAAATCGCATTGTTTTAACACTCACTACCGCATATAACAAACAATTACGGGATTTATCAAGCACTTTAA
TTCAATAG

Upstream 100 bases:

>100_bases
GTAAGTAATTACCCCTCACTTTTATGTATTATAGATCAGTAAAATGATCAAAAAGTGCGGTCAGAATTTATCAAATTTTC
AATTTAGTTAAGGTTAATAT

Downstream 100 bases:

>100_bases
GGCGTCATATAATAATTTCTCTAAAATAATAAATGTTTAAAAATGAGACATAGATCATCCTTTTGAAAATTACTCTGATA
TTTATCTTTAAAACACTTGA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKKIILNLVTAIILAGCSSNPETLKATNDSFQKSETSIPHFSPLATGGVQLPKADDSYSLPNIEVKKGEDIDIRPPLIPL
AIIQNSITKFDGERSLIVYPKQQAKLYNLQQVERLLKEEGISSTTDGSILTTDWAKTERIGDKSIEIKYQIEQVMTADVS
ALTVSILHMRRDGIIFTPNVSDKQYYTSERLNRIVLTLTTAYNKQLRDLSSTLIQ

Sequences:

>Translated_215_residues
MKKIILNLVTAIILAGCSSNPETLKATNDSFQKSETSIPHFSPLATGGVQLPKADDSYSLPNIEVKKGEDIDIRPPLIPL
AIIQNSITKFDGERSLIVYPKQQAKLYNLQQVERLLKEEGISSTTDGSILTTDWAKTERIGDKSIEIKYQIEQVMTADVS
ALTVSILHMRRDGIIFTPNVSDKQYYTSERLNRIVLTLTTAYNKQLRDLSSTLIQ
>Mature_215_residues
MKKIILNLVTAIILAGCSSNPETLKATNDSFQKSETSIPHFSPLATGGVQLPKADDSYSLPNIEVKKGEDIDIRPPLIPL
AIIQNSITKFDGERSLIVYPKQQAKLYNLQQVERLLKEEGISSTTDGSILTTDWAKTERIGDKSIEIKYQIEQVMTADVS
ALTVSILHMRRDGIIFTPNVSDKQYYTSERLNRIVLTLTTAYNKQLRDLSSTLIQ

Specific function: Non-Essential Lipoprotein. [C]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=213, Percent_Identity=28.6384976525822, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y256_HAEIN (P43973)

Other databases:

- EMBL:   L42023
- PIR:   I64004
- RefSeq:   NP_438425.1
- GeneID:   949378
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0256
- NMPDR:   fig|71421.1.peg.241
- TIGR:   HI_0256
- HOGENOM:   HBG495082
- OMA:   KTERIGD
- ProtClustDB:   CLSK808397
- BioCyc:   HINF71421:HI_0256-MONOMER
- InterPro:   IPR010653

Pfam domain/function: PF06804 Lipoprotein_18

EC number: NA

Molecular weight: Translated: 24012; Mature: 24012

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIILNLVTAIILAGCSSNPETLKATNDSFQKSETSIPHFSPLATGGVQLPKADDSYSL
CHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC
PNIEVKKGEDIDIRPPLIPLAIIQNSITKFDGERSLIVYPKQQAKLYNLQQVERLLKEEG
CCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCHHHHHHHHHHCC
ISSTTDGSILTTDWAKTERIGDKSIEIKYQIEQVMTADVSALTVSILHMRRDGIIFTPNV
CCCCCCCCEEEECCHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
SDKQYYTSERLNRIVLTLTTAYNKQLRDLSSTLIQ
CCCHHHHHHHHCEEEEEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIILNLVTAIILAGCSSNPETLKATNDSFQKSETSIPHFSPLATGGVQLPKADDSYSL
CHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC
PNIEVKKGEDIDIRPPLIPLAIIQNSITKFDGERSLIVYPKQQAKLYNLQQVERLLKEEG
CCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCHHHHHHHHHHCC
ISSTTDGSILTTDWAKTERIGDKSIEIKYQIEQVMTADVSALTVSILHMRRDGIIFTPNV
CCCCCCCCEEEECCHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
SDKQYYTSERLNRIVLTLTTAYNKQLRDLSSTLIQ
CCCHHHHHHHHCEEEEEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023