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The map label for this gene is tonB

Identifier: 16272209

GI number: 16272209

Start: 283108

End: 283920

Strand: Reverse

Name: tonB

Synonym: HI0251

Alternate gene names: 16272209

Gene position: 283920-283108 (Counterclockwise)

Preceding gene: 16272210

Following gene: 16272207

Centisome position: 15.51

GC content: 40.22

Gene sequence:

>813_bases
ATGCAGCAAACAAAACGTTCGCTATTGGGTTTGCTTATTTCTTTGATCGCACACGGTATTGTTATAGGATTTATCTTATG
GAATTGGAATGAGCCAAGTGATAGCGCAAATAGTGCACAAGGCGATATATCTACAAGTATTTCTATGGAGCTATTACAGG
GCATGGTGTTGGAAGAACCTGCTCCAGAGCCAGAAGATGTACAAAAAGAGCCAGAGCCAGAGCCAGAGCCAGGAAATGTA
CAAAAAGAGCCAGAACCAGAAAAACAAGAAATTGTAGAAGATCCAACAATAAAACCTGAACCGAAAAAAATCAAAGAACC
AGAAAAGGAAAAGCCAAAACCCAAAGGAAAACCAAAAGGAAAGCCGAAGAATAAACCTAAAAAAGAGGTTAAACCACAAA
AGAAACCAATCAATAAAGAGCTACCAAAAGGCGATGAAAATATTGATTCAAGTGCCAACGTAAATGATAAAGCAAGTACA
ACAAGCGCAGCTAATAGCAATGCACAGGTAGCAGGAAGTGGAACGGATACGAGTGAAATAGCGGCTTACCGTTCTGCAAT
CCGCCGTGAAATTGAAAGCCATAAACGTTATCCAACTCGAGCGAAGATAATGCGCAAACAAGGAAAAGTGAGTGTATCTT
TTAATGTAGGAGCTGATGGTTCGTTAAGTGGTGCTAAGGTTACAAAATCCTCAGGCGATGAAAGTTTAGATAAGGCGGCA
TTAGACGCTATTAACGTATCTCGCTCTGTTGGAACAAGACCCGCAGGATTTCCTTCGAGTTTAAGTGTGCAAATTAGTTT
TACTCTTCAATAA

Upstream 100 bases:

>100_bases
GGCAATTGTTTCTATGAAAGATAAGGGAAAAAGTGCGGGTAAAAATTCTCAAGAATCTACTCCTTCCCAATCTGTACCAA
CTACGCCGTAAGGAATAATT

Downstream 100 bases:

>100_bases
AATGTGATATGGAAGATAAATGGTAGCAATTAATCTTCCCTAAAACTAAAGCTATAAAATTAAGGACTAAATCTATAATC
ATAGGTTTAGTCCTTTTAAT

Product: TonB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPEPEPEPGNV
QKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKGKPKGKPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKAST
TSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAA
LDAINVSRSVGTRPAGFPSSLSVQISFTLQ

Sequences:

>Translated_270_residues
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPEPEPEPGNV
QKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKGKPKGKPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKAST
TSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAA
LDAINVSRSVGTRPAGFPSSLSVQISFTLQ
>Mature_270_residues
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPEPEPEPGNV
QKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKGKPKGKPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKAST
TSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAA
LDAINVSRSVGTRPAGFPSSLSVQISFTLQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TONB_HAEIN (P42872)

Other databases:

- EMBL:   U04996
- EMBL:   L42023
- PIR:   F64057
- RefSeq:   NP_438420.1
- ProteinModelPortal:   P42872
- SMR:   P42872
- GeneID:   949372
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0251
- NMPDR:   fig|71421.1.peg.236
- TIGR:   HI_0251
- HOGENOM:   HBG495371
- OMA:   IDSSANV
- ProtClustDB:   CLSK870390
- BioCyc:   HINF71421:HI_0251-MONOMER
- GO:   GO:0009405
- InterPro:   IPR003538
- InterPro:   IPR006260
- PRINTS:   PR01374
- TIGRFAMs:   TIGR01352

Pfam domain/function: PF03544 TonB

EC number: NA

Molecular weight: Translated: 29193; Mature: 29193

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x405b5224)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APEPEDVQKEPEPEPEPGNVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKGKPKG
CCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCCC
KPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEI
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
AAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAA
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHH
LDAINVSRSVGTRPAGFPSSLSVQISFTLQ
HHHHHHHHHCCCCCCCCCCCEEEEEEEEEH
>Mature Secondary Structure
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APEPEDVQKEPEPEPEPGNVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKGKPKG
CCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCCC
KPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEI
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
AAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAA
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHH
LDAINVSRSVGTRPAGFPSSLSVQISFTLQ
HHHHHHHHHCCCCCCCCCCCEEEEEEEEEH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8188372; 7542800