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The map label for this gene is yajC [C]

Identifier: 16272201

GI number: 16272201

Start: 270398

End: 270691

Strand: Reverse

Name: yajC [C]

Synonym: HI0241

Alternate gene names: 16272201

Gene position: 270691-270398 (Counterclockwise)

Preceding gene: 16272202

Following gene: 16272200

Centisome position: 14.79

GC content: 37.07

Gene sequence:

>294_bases
ATGGAAGCACAAAGCCCAATGTCCACGCTATTTATTTTCGTGATCTTTGGTTTAATTTTCTACTTTATGATTTATCGCCC
GCAAGCTAAACGCAATAAAGAACACAAAAAATTGATGTCTGAGCTTGCAAAAGGTACTGAAGTTTTAACCGCTGGTGGTG
TAATCGGCAAAATTACTAAAGTAACCGAAGGTAGCGATAGCATCGTGATTGCGTTAAACGACACGACAGAAATTACGATT
AATCGTAACTACATTGTGAGCGTTCTTCCTAAAGGTTCATTAAAATCACTTTAA

Upstream 100 bases:

>100_bases
CGCCATAACGTAGGATATTGGGCTTAGTTCGCCTTTCCCAATGAAGCAATTTATGGTATTTTACGCAAAATTTTTAACTT
AAATTAATAAGGAAAACACA

Downstream 100 bases:

>100_bases
GAATAACATTAAATTATTTTCCAGAGCCACGCATTGTGGCTCTGTGCGTTAGAAAAGAAAAGGAAAACTATGTTAAACCG
TTATCCATTATGGAAGAATT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MEAQSPMSTLFIFVIFGLIFYFMIYRPQAKRNKEHKKLMSELAKGTEVLTAGGVIGKITKVTEGSDSIVIALNDTTEITI
NRNYIVSVLPKGSLKSL

Sequences:

>Translated_97_residues
MEAQSPMSTLFIFVIFGLIFYFMIYRPQAKRNKEHKKLMSELAKGTEVLTAGGVIGKITKVTEGSDSIVIALNDTTEITI
NRNYIVSVLPKGSLKSL
>Mature_97_residues
MEAQSPMSTLFIFVIFGLIFYFMIYRPQAKRNKEHKKLMSELAKGTEVLTAGGVIGKITKVTEGSDSIVIALNDTTEITI
NRNYIVSVLPKGSLKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family

Homologues:

Organism=Escherichia coli, GI1786608, Length=93, Percent_Identity=62.3655913978495, Blast_Score=127, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y241_HAEIN (P44592)

Other databases:

- EMBL:   L42023
- PIR:   A64146
- RefSeq:   NP_438411.1
- ProteinModelPortal:   P44592
- SMR:   P44592
- GeneID:   949367
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0241
- TIGR:   HI_0241
- HOGENOM:   HBG730023
- OMA:   GYIASIK
- ProtClustDB:   PRK05585
- BioCyc:   HINF71421:HI_0241-MONOMER
- InterPro:   IPR003849
- PRINTS:   PR01853
- TIGRFAMs:   TIGR00739

Pfam domain/function: PF02699 YajC

EC number: NA

Molecular weight: Translated: 10754; Mature: 10754

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x405c1a4c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAQSPMSTLFIFVIFGLIFYFMIYRPQAKRNKEHKKLMSELAKGTEVLTAGGVIGKITK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCEEEECCCCCEEEEE
VTEGSDSIVIALNDTTEITINRNYIVSVLPKGSLKSL
ECCCCCEEEEEECCCEEEEEECCEEEEEECCCCCCCH
>Mature Secondary Structure
MEAQSPMSTLFIFVIFGLIFYFMIYRPQAKRNKEHKKLMSELAKGTEVLTAGGVIGKITK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCEEEECCCCCEEEEE
VTEGSDSIVIALNDTTEITINRNYIVSVLPKGSLKSL
ECCCCCEEEEEECCCEEEEEECCEEEEEECCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800