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The map label for this gene is yfiH [C]

Identifier: 16272140

GI number: 16272140

Start: 188140

End: 188874

Strand: Reverse

Name: yfiH [C]

Synonym: HI0175

Alternate gene names: 16272140

Gene position: 188874-188140 (Counterclockwise)

Preceding gene: 16272141

Following gene: 16272129

Centisome position: 10.32

GC content: 39.59

Gene sequence:

>735_bases
ATGCAAGCAATTAACCCCAATTGGAATGTTCCAAAGAATATTCATGCCTTTACCACTACTCGTGAAGGGGGTGTGAGCTT
AGCGCCTTATTTGAGTTTCAACTTAGGCGATCATGTCGGTGATAACAAAAGTGCGGTAAAAACCAACCGCACTTTATTAG
TAGAAAAATTTGGTTTGCCACAAACACCTATATTTCTAACTCAAACACACAGTACTCGAGTGATTCAATTACCTTATTCA
GGACAAAATCTTGAAGCGGATGCAGTTTATACAAATGTTCCCAATCAAGTTTGCGTTGTTATGACGGCAGACTGTTTGCC
AGTTCTATTCACTACAACATCTGGCAATGAAGTGGCTGCAACACATGCTGGCTGGCGTGGTTTATGCGATGGTGTACTAG
AAGAAACAGTGAAATATTTTCAAGCTAAACCTGAAGATATTATCGCGTGGTTTGGCCCTGCAATAGGTCCAAAGGCCTTT
CAAGTTGGGATTGATGTTGTAGAAAAGTTTGTTGTAGTAGATGAAAAAGCCAAACTCGCCTTTCAACCTGATGCAATCGA
AGAAGGTAAATACCTGAGTAATCTTTATCAAATTGCAACTCAGCGATTAAACAATCTAGGTATTACGCAAATTTATGGTG
GAAATCACTGTACATTCAACGAAAAAGAAAAGTTCTTTTCTTATCGCAGGGACAATCAAACGGGACGAATGGCGAGCGTC
ATTTGGTTTGAATAA

Upstream 100 bases:

>100_bases
ATGATGGAATGGTATGCACCATTACCAGATGATTTCGTTGAATTGCTTAATGCCCTCAAAGCCGACTATCTCGAACATCA
AGATGAGTTAGATTATTAAT

Downstream 100 bases:

>100_bases
ATAGTTTAAAAGCGCATTTTACGCGCTTTTAGTCATCTTTGTTTTATATTCTTTCTGCGATAATACCGCCACCCAAACAA
ACTTCGCCAAGGTAAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MQAINPNWNVPKNIHAFTTTREGGVSLAPYLSFNLGDHVGDNKSAVKTNRTLLVEKFGLPQTPIFLTQTHSTRVIQLPYS
GQNLEADAVYTNVPNQVCVVMTADCLPVLFTTTSGNEVAATHAGWRGLCDGVLEETVKYFQAKPEDIIAWFGPAIGPKAF
QVGIDVVEKFVVVDEKAKLAFQPDAIEEGKYLSNLYQIATQRLNNLGITQIYGGNHCTFNEKEKFFSYRRDNQTGRMASV
IWFE

Sequences:

>Translated_244_residues
MQAINPNWNVPKNIHAFTTTREGGVSLAPYLSFNLGDHVGDNKSAVKTNRTLLVEKFGLPQTPIFLTQTHSTRVIQLPYS
GQNLEADAVYTNVPNQVCVVMTADCLPVLFTTTSGNEVAATHAGWRGLCDGVLEETVKYFQAKPEDIIAWFGPAIGPKAF
QVGIDVVEKFVVVDEKAKLAFQPDAIEEGKYLSNLYQIATQRLNNLGITQIYGGNHCTFNEKEKFFSYRRDNQTGRMASV
IWFE
>Mature_244_residues
MQAINPNWNVPKNIHAFTTTREGGVSLAPYLSFNLGDHVGDNKSAVKTNRTLLVEKFGLPQTPIFLTQTHSTRVIQLPYS
GQNLEADAVYTNVPNQVCVVMTADCLPVLFTTTSGNEVAATHAGWRGLCDGVLEETVKYFQAKPEDIIAWFGPAIGPKAF
QVGIDVVEKFVVVDEKAKLAFQPDAIEEGKYLSNLYQIATQRLNNLGITQIYGGNHCTFNEKEKFFSYRRDNQTGRMASV
IWFE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family

Homologues:

Organism=Homo sapiens, GI190194374, Length=237, Percent_Identity=27.8481012658228, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI190194372, Length=237, Percent_Identity=27.8481012658228, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1788945, Length=244, Percent_Identity=56.1475409836066, Blast_Score=278, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y175_HAEIN (P44552)

Other databases:

- EMBL:   L42023
- PIR:   E64144
- RefSeq:   NP_438343.1
- ProteinModelPortal:   P44552
- SMR:   P44552
- GeneID:   951085
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0175
- NMPDR:   fig|71421.1.peg.164
- TIGR:   HI_0175
- HOGENOM:   HBG751647
- OMA:   PQAFEVG
- ProtClustDB:   CLSK870585
- BioCyc:   HINF71421:HI_0175-MONOMER
- InterPro:   IPR003730
- InterPro:   IPR011324
- Gene3D:   G3DSA:3.60.140.10
- TIGRFAMs:   TIGR00726

Pfam domain/function: PF02578 Cu-oxidase_4; SSF64438 Cytotoxic_necrot_fac-like_cat

EC number: NA

Molecular weight: Translated: 27138; Mature: 27138

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAINPNWNVPKNIHAFTTTREGGVSLAPYLSFNLGDHVGDNKSAVKTNRTLLVEKFGLP
CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEECCCEEEEEECCCC
QTPIFLTQTHSTRVIQLPYSGQNLEADAVYTNVPNQVCVVMTADCLPVLFTTTSGNEVAA
CCCEEEEECCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEEEEECCCCEEEE
THAGWRGLCDGVLEETVKYFQAKPEDIIAWFGPAIGPKAFQVGIDVVEKFVVVDEKAKLA
ECCCHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHEECCCCCEE
FQPDAIEEGKYLSNLYQIATQRLNNLGITQIYGGNHCTFNEKEKFFSYRRDNQTGRMASV
ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEE
IWFE
EEEC
>Mature Secondary Structure
MQAINPNWNVPKNIHAFTTTREGGVSLAPYLSFNLGDHVGDNKSAVKTNRTLLVEKFGLP
CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEECCCEEEEEECCCC
QTPIFLTQTHSTRVIQLPYSGQNLEADAVYTNVPNQVCVVMTADCLPVLFTTTSGNEVAA
CCCEEEEECCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEEEEECCCCEEEE
THAGWRGLCDGVLEETVKYFQAKPEDIIAWFGPAIGPKAFQVGIDVVEKFVVVDEKAKLA
ECCCHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHEECCCCCEE
FQPDAIEEGKYLSNLYQIATQRLNNLGITQIYGGNHCTFNEKEKFFSYRRDNQTGRMASV
ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEE
IWFE
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800