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The map label for this gene is ycjF [C]

Identifier: 16272018

GI number: 16272018

Start: 45185

End: 46249

Strand: Reverse

Name: ycjF [C]

Synonym: HI0043

Alternate gene names: 16272018

Gene position: 46249-45185 (Counterclockwise)

Preceding gene: 16272019

Following gene: 16272017

Centisome position: 2.53

GC content: 35.68

Gene sequence:

>1065_bases
ATGGAAAAACAAATTTTTGAACATTCAGTTAATGTAGAGGAAGAACACTATCAGCCCAAGCAAGAATTCCATAATATGGA
AGCAAAGCTAGATGAAGCGTTGGACGGAGAGTTACTTGATGCTCAACTTGAACAAGCATTGAAACCAAAATCCAGTTTTA
GAAAAACTTTATTAAAATTTACTGCACTTTTATTTGGCTTGGCGACGGTTGCGCAATCCGTGCAGTGGATTTGGGATAGC
TATCAAAAACATCAATGGATTTATCTTGCTTTTGCTTTAGTCAGTTTGATTATCATTTTATTGGGTATTAAAGAGATTAT
TTGTGAGTGGCGACGTTTAGTTCGTTTAAAAAAACGTGAGCAATGGCAACAACAAAGTCAGCAGATTTGGTTAGAAAGTG
CGGTAAAAAATGGTGATGTTTTTTCCGTTCATAACGCAGAAAAAAGTAAAATTCTTTGCTTAGATATTGCAAAATCTTTA
GGTTTGGAAAATGATTCTCCAACGGTAATTCAATGGCAACACCAATTAAATGAAGCTTATTCGGCGCAAGAAATTGCTCA
TTTATTCAGTCGTCATGTTTTGTCTTCTTTTGATGCACAAGCTAAAAAATTGATTAGTAAAATGGCAGCTGAATCAGCTG
TGATTGTCGCGATTAGTCCACTTGCTGTAGTGGATATGTTTTTTATTGCGTGGCGCAATCTTCGATTAATGAATAAGATT
GCTGAAATTTATGGGATTGAATTAGGGTATTTTCCACGTATTAGATTGTTAAGAATGGTATTGGTCAATATCGCTTTTGC
TGGAGCAACCGAAGTGGCACAAGATATTGGAATGGATTGGCTTTCTCAAGATGTGACAGCAAAATTATCTACACGTATCG
CTCAAGGAATTGGTGTGGGATTACTCACTGCTAGATTAGGCGTGAAAGCAATGGAACTTTGTCGTCCGTTAGCATTTCAA
TTAAACGAAAAACCAAAACTGTCACATATTCAACAGGAATTACTTAGTTCGGTAAAAGATATTGTTCTCGGTAAAAATAA
AATTTACAAAAAGGAGCAAATCTGA

Upstream 100 bases:

>100_bases
GTTTATTAAGATTACTTTCTATCTTTTCAAGTGATGAATAATGATTGATTTTTGACTTTATAACCCCACTATTTAGTGGG
GTTATTTTTTGGGATAGGCA

Downstream 100 bases:

>100_bases
TGGAAATCGAGGTTGTTTATCAACATAGCGATTTTATTATTATCAACAAGTCTGAGGGTATTAGCGTTCATAAAGATCAA
GAAGAACAAGGCTTAACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQKHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKREQWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPTVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFPRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI

Sequences:

>Translated_354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQKHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKREQWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPTVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFPRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI
>Mature_354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQKHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKREQWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPTVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFPRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family

Homologues:

Organism=Escherichia coli, GI1787582, Length=345, Percent_Identity=40.5797101449275, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y043_HAEIN (P43931)

Other databases:

- EMBL:   L42023
- PIR:   C64000
- RefSeq:   NP_438216.1
- GeneID:   950940
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0043
- NMPDR:   fig|71421.1.peg.42
- TIGR:   HI_0043
- HOGENOM:   HBG678275
- OMA:   IGMDWLS
- ProtClustDB:   PRK05415
- BioCyc:   HINF71421:HI_0043-MONOMER
- HAMAP:   MF_01085
- InterPro:   IPR021147
- InterPro:   IPR006507
- TIGRFAMs:   TIGR01620

Pfam domain/function: PF05128 DUF697

EC number: NA

Molecular weight: Translated: 40437; Mature: 40437

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbc09ad4)-; HASH(0xb2d2d08)-; HASH(0xb5183d4)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKF
CCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHH
TALLFGLATVAQSVQWIWDSYQKHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSLGLENDSPTVIQWQHQLNEAY
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH
SAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
AEIYGIELGYFPRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVG
HHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLTARLGVKAMELCRPLAFQLNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHCCH
>Mature Secondary Structure
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKF
CCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHH
TALLFGLATVAQSVQWIWDSYQKHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSLGLENDSPTVIQWQHQLNEAY
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH
SAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
AEIYGIELGYFPRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVG
HHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLTARLGVKAMELCRPLAFQLNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800