| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is chiA1 [H]
Identifier: 162448121
GI number: 162448121
Start: 1339061
End: 1341043
Strand: Direct
Name: chiA1 [H]
Synonym: ACL_1282
Alternate gene names: 162448121
Gene position: 1339061-1341043 (Clockwise)
Preceding gene: 162448120
Following gene: 162448122
Centisome position: 89.45
GC content: 34.39
Gene sequence:
>1983_bases ATGAAAACGTATACACTTATGAATAAGGATGATGATTTAATGAAAAAAATACTATTAATGTTACTCACCACTTTAATTTC TATATATTTGGTAGCTTGTATACCAAAAGCACAAGCCTTTGACGTCTTATTTGACGTAAATGGAGGCTTTTGGCATAAAG ATGAACTTGCTACCACACGCCCAGATGCAACTGTCACAATCAGGGATTTTGATAACTATTTAGGGGATAATACAAACTTT ACTCTGTTTTCTCCTACTGATATAGGTTTAAGATGGCATTATAAAATATTTATACAATATAATGCTGATTTAGAAACCTA TGTAGTTGTTTATAGCGATCCTTATACTGCTTCTGTTGATCGCCTAGATTTACCAGATTATGACTACATCATCGGAGTGC ATTACCATAATTCTGTTATCGAATCTGACCCAGTATTTATAAATCTATTTACAGATGGTGTGGGAACTCCACTCATCTTT AATAAAGATATTACAGTACCTCAAGAAAGTGTTGAGTTTAAAGTATATCCTAAAAATCCGGATGCTAGTAGTTTTAAATT ACTATCAGATGAGATTAATGAACTACCAACCCCTGTAAGACCTGATTTTGATTTTAAAGGTTGGTATGTCGAAGATAACC TTATTACAAAAGCTAAAGATATTAAATTAAAGTCAGGTGATACCATGACAACACTTACTGCACACTGGGAAAGTTACTCC CTTGAATCCTTAGAAGCTTTACTTGATAATCTAATTCCTGATCATGTAACAGATAGTTTAGCACTACCAGTTACATATAG TGGTTATACTTTAACTTGGGAAACTTCACATCCATTAGTAATTAGCACGACTGGTAAATTCCATGCAGCCTATGAACCTA CTACTGTCACATTAACTGCACATATTACATCATTAGACAATACAACAGTCATTCGTACCTTTAATGTCACAGTACCTAAC AAGAAACCTTTAACACTTCCAATAGCATCTAGCTATATTTGGAGAAACTACGCACTTGTAGATGAGCGTTTCTTCCAAAC ACTTGATATCATTAATACCGCATTTATAACAGCAGATGCAAATGGTAACTTCTCTGGCACTGCTCAATTAAGTGATATTG AAACTTATATACTACCTAAATCAAAAATTTATAACAACTGGGTTGTCTTTTCTGTAGCACCAGAATCTAGATGGTCTGAA ATTGCTATGAGTGCTACAAAAATAGAAAACTTTGCTAATAACATCGTAGACATCATCAATACCTATGGTTTTGATGGTGT AGATATTGACTGGGAAACACCAAGATCTGGTGAAGAAGTTAGATATTCCAATATGATGAAAGTGATTTATGAAAAGGTTA AAGCCAATAACCCAAATCACTTAGTAACTACTGCAATTACTGGTGGTCGCTGGCAACCACCAATGTATAACTTAACTGTC TCAAATCAGTATCTAGATTTCATTAACGTCATGACCTATTCAATGTCAAGTTCAGGTGGCAGTTATCAAAATGCACTACA CCCAAGAAGCGGTGTACATAATACAGAATTTAATGCAGGTCGTACACCTGCAACTGCAACAATTTCAGAATCAGTACCAA TATTTAATGGTTATGGTGTGCCAAACTCTAAATTAATCTTTGGCTTAGCTTTTTATGGTGTACGTCAACAAAGAACATAT AATACTTCAACAAATACTTGGTCAAATTGGACTGCAACATCCCCAAGTGTCTTCTTCCCTGAAATTCAATCAAGCTATTT AAACAATCCTGACTACTTATACTTCTTTGATAATGAAGCAGGTGTACCTTACCTTGTTAAAAAAGATGGCACCATCTTTA TTAGCTATGATAATGAACGTTCAATCAGACTCAAATCAGAGTATGTGATTGAACATGGTTTAGGTGGTTTAATGTTTTGG GAATATGGTGCAGACACCTCTGGAACACTACTTCAACAAATGCGTACTAGCCTAAATAAATAA
Upstream 100 bases:
>100_bases ACAGTATTTTTTTATACCCCTTGAAAAGTGTAATTATTTATATAATTTGAATAAATCTTTCATATTTATTCATATTTTCT ATAGATGTTGTAAAATAACA
Downstream 100 bases:
>100_bases GAAATAATCCATCCCTTTTTCCCTATATGAAAAAGGGATTTTCTTACGTCATTTTTACACAAAAATTTATTATTGTAAAA AATGAATTATATGTGTATAC
Product: surface-anchored extracellular glycosyl hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MKTYTLMNKDDDLMKKILLMLLTTLISIYLVACIPKAQAFDVLFDVNGGFWHKDELATTRPDATVTIRDFDNYLGDNTNF TLFSPTDIGLRWHYKIFIQYNADLETYVVVYSDPYTASVDRLDLPDYDYIIGVHYHNSVIESDPVFINLFTDGVGTPLIF NKDITVPQESVEFKVYPKNPDASSFKLLSDEINELPTPVRPDFDFKGWYVEDNLITKAKDIKLKSGDTMTTLTAHWESYS LESLEALLDNLIPDHVTDSLALPVTYSGYTLTWETSHPLVISTTGKFHAAYEPTTVTLTAHITSLDNTTVIRTFNVTVPN KKPLTLPIASSYIWRNYALVDERFFQTLDIINTAFITADANGNFSGTAQLSDIETYILPKSKIYNNWVVFSVAPESRWSE IAMSATKIENFANNIVDIINTYGFDGVDIDWETPRSGEEVRYSNMMKVIYEKVKANNPNHLVTTAITGGRWQPPMYNLTV SNQYLDFINVMTYSMSSSGGSYQNALHPRSGVHNTEFNAGRTPATATISESVPIFNGYGVPNSKLIFGLAFYGVRQQRTY NTSTNTWSNWTATSPSVFFPEIQSSYLNNPDYLYFFDNEAGVPYLVKKDGTIFISYDNERSIRLKSEYVIEHGLGGLMFW EYGADTSGTLLQQMRTSLNK
Sequences:
>Translated_660_residues MKTYTLMNKDDDLMKKILLMLLTTLISIYLVACIPKAQAFDVLFDVNGGFWHKDELATTRPDATVTIRDFDNYLGDNTNF TLFSPTDIGLRWHYKIFIQYNADLETYVVVYSDPYTASVDRLDLPDYDYIIGVHYHNSVIESDPVFINLFTDGVGTPLIF NKDITVPQESVEFKVYPKNPDASSFKLLSDEINELPTPVRPDFDFKGWYVEDNLITKAKDIKLKSGDTMTTLTAHWESYS LESLEALLDNLIPDHVTDSLALPVTYSGYTLTWETSHPLVISTTGKFHAAYEPTTVTLTAHITSLDNTTVIRTFNVTVPN KKPLTLPIASSYIWRNYALVDERFFQTLDIINTAFITADANGNFSGTAQLSDIETYILPKSKIYNNWVVFSVAPESRWSE IAMSATKIENFANNIVDIINTYGFDGVDIDWETPRSGEEVRYSNMMKVIYEKVKANNPNHLVTTAITGGRWQPPMYNLTV SNQYLDFINVMTYSMSSSGGSYQNALHPRSGVHNTEFNAGRTPATATISESVPIFNGYGVPNSKLIFGLAFYGVRQQRTY NTSTNTWSNWTATSPSVFFPEIQSSYLNNPDYLYFFDNEAGVPYLVKKDGTIFISYDNERSIRLKSEYVIEHGLGGLMFW EYGADTSGTLLQQMRTSLNK >Mature_660_residues MKTYTLMNKDDDLMKKILLMLLTTLISIYLVACIPKAQAFDVLFDVNGGFWHKDELATTRPDATVTIRDFDNYLGDNTNF TLFSPTDIGLRWHYKIFIQYNADLETYVVVYSDPYTASVDRLDLPDYDYIIGVHYHNSVIESDPVFINLFTDGVGTPLIF NKDITVPQESVEFKVYPKNPDASSFKLLSDEINELPTPVRPDFDFKGWYVEDNLITKAKDIKLKSGDTMTTLTAHWESYS LESLEALLDNLIPDHVTDSLALPVTYSGYTLTWETSHPLVISTTGKFHAAYEPTTVTLTAHITSLDNTTVIRTFNVTVPN KKPLTLPIASSYIWRNYALVDERFFQTLDIINTAFITADANGNFSGTAQLSDIETYILPKSKIYNNWVVFSVAPESRWSE IAMSATKIENFANNIVDIINTYGFDGVDIDWETPRSGEEVRYSNMMKVIYEKVKANNPNHLVTTAITGGRWQPPMYNLTV SNQYLDFINVMTYSMSSSGGSYQNALHPRSGVHNTEFNAGRTPATATISESVPIFNGYGVPNSKLIFGLAFYGVRQQRTY NTSTNTWSNWTATSPSVFFPEIQSSYLNNPDYLYFFDNEAGVPYLVKKDGTIFISYDNERSIRLKSEYVIEHGLGGLMFW EYGADTSGTLLQQMRTSLNK
Specific function: Unknown
COG id: COG3325
COG function: function code G; Chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 fibronectin type-III domains [H]
Homologues:
Organism=Homo sapiens, GI144226251, Length=271, Percent_Identity=23.9852398523985, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI4502809, Length=268, Percent_Identity=22.7611940298507, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI133893286, Length=270, Percent_Identity=24.4444444444444, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI42542398, Length=270, Percent_Identity=24.4444444444444, Blast_Score=69, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71995504, Length=266, Percent_Identity=28.1954887218045, Blast_Score=89, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17559362, Length=279, Percent_Identity=25.8064516129032, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI193210674, Length=350, Percent_Identity=23.4285714285714, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17531695, Length=312, Percent_Identity=25.3205128205128, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17551250, Length=262, Percent_Identity=25.9541984732824, Blast_Score=66, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320579, Length=272, Percent_Identity=23.8970588235294, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI22024049, Length=287, Percent_Identity=28.9198606271777, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI221330815, Length=263, Percent_Identity=26.615969581749, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI45550474, Length=278, Percent_Identity=24.8201438848921, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI161077700, Length=273, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI221329807, Length=293, Percent_Identity=27.9863481228669, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI28573679, Length=262, Percent_Identity=27.4809160305344, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24656647, Length=260, Percent_Identity=26.1538461538462, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR011583 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR001223 - InterPro: IPR001579 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 [H]
Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]
EC number: =3.2.1.14 [H]
Molecular weight: Translated: 74706; Mature: 74706
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS01095 CHITINASE_18
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYTLMNKDDDLMKKILLMLLTTLISIYLVACIPKAQAFDVLFDVNGGFWHKDELATTR CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCC PDATVTIRDFDNYLGDNTNFTLFSPTDIGLRWHYKIFIQYNADLETYVVVYSDPYTASVD CCCEEEEEECHHHCCCCCCEEEECCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCC RLDLPDYDYIIGVHYHNSVIESDPVFINLFTDGVGTPLIFNKDITVPQESVEFKVYPKNP CCCCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCC DASSFKLLSDEINELPTPVRPDFDFKGWYVEDNLITKAKDIKLKSGDTMTTLTAHWESYS CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEECCCEEEEECCCEEEEEEECCCCCC LESLEALLDNLIPDHVTDSLALPVTYSGYTLTWETSHPLVISTTGKFHAAYEPTTVTLTA HHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCCEEEEECCEEEEEEE HITSLDNTTVIRTFNVTVPNKKPLTLPIASSYIWRNYALVDERFFQTLDIINTAFITADA EEEECCCEEEEEEEEEECCCCCCEEEEECCCHHHCEEEHHHHHHHHHHHHHEEEEEEECC NGNFSGTAQLSDIETYILPKSKIYNNWVVFSVAPESRWSEIAMSATKIENFANNIVDIIN CCCCCCEEEECCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TYGFDGVDIDWETPRSGEEVRYSNMMKVIYEKVKANNPNHLVTTAITGGRWQPPMYNLTV HCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEE SNQYLDFINVMTYSMSSSGGSYQNALHPRSGVHNTEFNAGRTPATATISESVPIFNGYGV CCHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCC PNSKLIFGLAFYGVRQQRTYNTSTNTWSNWTATSPSVFFPEIQSSYLNNPDYLYFFDNEA CCCCEEEEEEECCEECCEEECCCCCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEEECCC GVPYLVKKDGTIFISYDNERSIRLKSEYVIEHGLGGLMFWEYGADTSGTLLQQMRTSLNK CCCEEEECCCEEEEEECCCCEEEEEHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKTYTLMNKDDDLMKKILLMLLTTLISIYLVACIPKAQAFDVLFDVNGGFWHKDELATTR CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCC PDATVTIRDFDNYLGDNTNFTLFSPTDIGLRWHYKIFIQYNADLETYVVVYSDPYTASVD CCCEEEEEECHHHCCCCCCEEEECCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCC RLDLPDYDYIIGVHYHNSVIESDPVFINLFTDGVGTPLIFNKDITVPQESVEFKVYPKNP CCCCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCC DASSFKLLSDEINELPTPVRPDFDFKGWYVEDNLITKAKDIKLKSGDTMTTLTAHWESYS CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEECCCEEEEECCCEEEEEEECCCCCC LESLEALLDNLIPDHVTDSLALPVTYSGYTLTWETSHPLVISTTGKFHAAYEPTTVTLTA HHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCCEEEEECCEEEEEEE HITSLDNTTVIRTFNVTVPNKKPLTLPIASSYIWRNYALVDERFFQTLDIINTAFITADA EEEECCCEEEEEEEEEECCCCCCEEEEECCCHHHCEEEHHHHHHHHHHHHHEEEEEEECC NGNFSGTAQLSDIETYILPKSKIYNNWVVFSVAPESRWSEIAMSATKIENFANNIVDIIN CCCCCCEEEECCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TYGFDGVDIDWETPRSGEEVRYSNMMKVIYEKVKANNPNHLVTTAITGGRWQPPMYNLTV HCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEE SNQYLDFINVMTYSMSSSGGSYQNALHPRSGVHNTEFNAGRTPATATISESVPIFNGYGV CCHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCC PNSKLIFGLAFYGVRQQRTYNTSTNTWSNWTATSPSVFFPEIQSSYLNNPDYLYFFDNEA CCCCEEEEEEECCEECCEEECCCCCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEEECCC GVPYLVKKDGTIFISYDNERSIRLKSEYVIEHGLGGLMFWEYGADTSGTLLQQMRTSLNK CCCEEEECCCEEEEEECCCCEEEEEHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2203782; 8103047 [H]