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The map label for this gene is bin3 [H]

Identifier: 162447939

GI number: 162447939

Start: 1119053

End: 1119631

Strand: Direct

Name: bin3 [H]

Synonym: ACL_1085

Alternate gene names: 162447939

Gene position: 1119053-1119631 (Clockwise)

Preceding gene: 162447928

Following gene: 162447946

Centisome position: 74.75

GC content: 29.71

Gene sequence:

>579_bases
ATGACATACGCATATATAAGAGTTTCTAGTAAGACTCAACTTATTGATAGACAACTATCAGAGATACACAAATTAAACAT
ACCAAATAAAAATATCTTCGTAGATAAAGAAAGTGGTAAAGATTTTAATAGAAAGCAATATAAAAGACTTAAAAGTAAAC
TCAAAAAAGATGACCTTGTTGTCATAAAAAGTATTGATAGATTAGGTAGGAACTATCAAATGATCATCGATGAATGGGCA
TATATCACAAGGACTGTAGGTGCAGATATAAGAGTATTAGACATGCCATTATTAGACACTAGATCACACCCAGAAAACTT
AGTAGGTAAGTTTATTAGTGATATTGTTCTACAAATACTTTCTTTTGTTGCAGAAAATGAGAGAGACAATATTAAACAAA
GGCAAGCTGAAGGTATTAGAATAGCAAAAGAAAAGGGCATCCACATGGGACGCCCTAGATATGTTAAGCCAGATAATTTT
GATGATATCGTTAGTTCATTTAAAAATAAACAAATAAGTCTTAATGAAGCCATTTCAACACTAGAATTATCTAAATCAAC
GTTTTATAAGTATTTATAA

Upstream 100 bases:

>100_bases
CGAGTTAACAAAGGTGTACCTTTTAGGAAAAAAGAGGTATTTTTTTATGCCCATTTAATGCTAGAATGGTAACTATATTA
TTTTAATAGGAGCTAGCATC

Downstream 100 bases:

>100_bases
TTTTTCAATAATAGGTAAATCAGCTGCTGCAAAATCATAGTCAGCCATTTCTTCCTTAGTTAAGAATTTTGTATCTAAGT
GTTCATTGGGTTTAAATTCA

Product: serine recombinase, site-specific

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTYAYIRVSSKTQLIDRQLSEIHKLNIPNKNIFVDKESGKDFNRKQYKRLKSKLKKDDLVVIKSIDRLGRNYQMIIDEWA
YITRTVGADIRVLDMPLLDTRSHPENLVGKFISDIVLQILSFVAENERDNIKQRQAEGIRIAKEKGIHMGRPRYVKPDNF
DDIVSSFKNKQISLNEAISTLELSKSTFYKYL

Sequences:

>Translated_192_residues
MTYAYIRVSSKTQLIDRQLSEIHKLNIPNKNIFVDKESGKDFNRKQYKRLKSKLKKDDLVVIKSIDRLGRNYQMIIDEWA
YITRTVGADIRVLDMPLLDTRSHPENLVGKFISDIVLQILSFVAENERDNIKQRQAEGIRIAKEKGIHMGRPRYVKPDNF
DDIVSSFKNKQISLNEAISTLELSKSTFYKYL
>Mature_191_residues
TYAYIRVSSKTQLIDRQLSEIHKLNIPNKNIFVDKESGKDFNRKQYKRLKSKLKKDDLVVIKSIDRLGRNYQMIIDEWAY
ITRTVGADIRVLDMPLLDTRSHPENLVGKFISDIVLQILSFVAENERDNIKQRQAEGIRIAKEKGIHMGRPRYVKPDNFD
DIVSSFKNKQISLNEAISTLELSKSTFYKYL

Specific function: Potential DNA invertase [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22439; Mature: 22308

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYAYIRVSSKTQLIDRQLSEIHKLNIPNKNIFVDKESGKDFNRKQYKRLKSKLKKDDLV
CEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCH
VIKSIDRLGRNYQMIIDEWAYITRTVGADIRVLDMPLLDTRSHPENLVGKFISDIVLQIL
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
SFVAENERDNIKQRQAEGIRIAKEKGIHMGRPRYVKPDNFDDIVSSFKNKQISLNEAIST
HHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHH
LELSKSTFYKYL
HHHHHHHHHHCC
>Mature Secondary Structure 
TYAYIRVSSKTQLIDRQLSEIHKLNIPNKNIFVDKESGKDFNRKQYKRLKSKLKKDDLV
EEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCH
VIKSIDRLGRNYQMIIDEWAYITRTVGADIRVLDMPLLDTRSHPENLVGKFISDIVLQIL
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
SFVAENERDNIKQRQAEGIRIAKEKGIHMGRPRYVKPDNFDDIVSSFKNKQISLNEAIST
HHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHH
LELSKSTFYKYL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2555186 [H]