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The map label for this gene is ybbK [C]

Identifier: 162447695

GI number: 162447695

Start: 870243

End: 871166

Strand: Direct

Name: ybbK [C]

Synonym: ACL_0837

Alternate gene names: 162447695

Gene position: 870243-871166 (Clockwise)

Preceding gene: 162447694

Following gene: 162447715

Centisome position: 58.13

GC content: 35.71

Gene sequence:

>924_bases
ATGGAACCAGGACAAGTAGTATTAATTGTATTAGTTGTTGTACTAGGTGTACTTGCATTACTTGTAATATCAGGTGTGCG
TATTGTTACACAAACTAAAAAGTACGTTGTAGAACGTTTAGGAGCTTATCACACAACATGGGGCGTTGGTATTCACTGGC
TTTTTCCATTTGTAGATAGAGTGGTATCTGTGGTATCACTTAAAGAACAAGTTAAAGACTTTGATCCACAAGCAGTAATC
ACTAAAGATAACGTTACAATGCAAATCGATACGATCGTATTTTATCAAGTTACAGATCCAAAACTTTATGCTTATGGTGT
TGAAAACCCAATACTAGCGATTGAAGCATTATCTGCTACAACACTTCGTAACATCTTAGGGGATTTAGAACTTGATACTT
CTTTAACCTCAAGAGATATTATCAACACCAAGATGCGCCACATCTTAGATGATGCTACTGATAAATGGGGTATTAAAGTA
AACCGTGTTGAAGTTAAAAACATTATGCCACCTAAAGACATTAGAGACTCTATGGAAAAGCAAATGCGTGCTGAACGTGA
AAGACGTCAAACCATTTTAATTGCTGAGGGTGAAAAACGTGCTAAGATTTTAGAAGCTGAAGGTATTAATGAATCGATTA
TTTTAAAAGCTCAAGCGGATAAACAACAAGTGATTTTAAACGCGGAAGCTCAAGCAGAATCTATTCGTCAATTAAAAGAA
GCTGAAGCATTAGGTATTAAGTTAATTAAAGAAGCTGCACCAGATGCAGCTGTACTACAAATTAAGGCTTATGAAGCACT
TGCTAAACTTGCTGAAGGTCAAGCTACAAAGATTGTAGTTCCATCTAATTTAGCCGATTTAGCTGGTACAGTGACTGCAT
TAACTGAAGTTGTTCAATCAGGTAAAGAACCAACTAAAAAATAA

Upstream 100 bases:

>100_bases
TCATCAGAAGATATTGAAGTAGGAGCTACTGTTCGTATTCTTGCAATTGAAGGAAATAAATTTATAGTAACTAAAATTAA
TAAGGAGGATTTAAATTAAT

Downstream 100 bases:

>100_bases
GTGGTAAATAAATAAGGTACTGTTCAAAGTGAACAGTACCTTTTATTATGTATATAATATCTCTTCTATGACTTTATCAT
TTAAGGATTCAACAAATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MEPGQVVLIVLVVVLGVLALLVISGVRIVTQTKKYVVERLGAYHTTWGVGIHWLFPFVDRVVSVVSLKEQVKDFDPQAVI
TKDNVTMQIDTIVFYQVTDPKLYAYGVENPILAIEALSATTLRNILGDLELDTSLTSRDIINTKMRHILDDATDKWGIKV
NRVEVKNIMPPKDIRDSMEKQMRAERERRQTILIAEGEKRAKILEAEGINESIILKAQADKQQVILNAEAQAESIRQLKE
AEALGIKLIKEAAPDAAVLQIKAYEALAKLAEGQATKIVVPSNLADLAGTVTALTEVVQSGKEPTKK

Sequences:

>Translated_307_residues
MEPGQVVLIVLVVVLGVLALLVISGVRIVTQTKKYVVERLGAYHTTWGVGIHWLFPFVDRVVSVVSLKEQVKDFDPQAVI
TKDNVTMQIDTIVFYQVTDPKLYAYGVENPILAIEALSATTLRNILGDLELDTSLTSRDIINTKMRHILDDATDKWGIKV
NRVEVKNIMPPKDIRDSMEKQMRAERERRQTILIAEGEKRAKILEAEGINESIILKAQADKQQVILNAEAQAESIRQLKE
AEALGIKLIKEAAPDAAVLQIKAYEALAKLAEGQATKIVVPSNLADLAGTVTALTEVVQSGKEPTKK
>Mature_307_residues
MEPGQVVLIVLVVVLGVLALLVISGVRIVTQTKKYVVERLGAYHTTWGVGIHWLFPFVDRVVSVVSLKEQVKDFDPQAVI
TKDNVTMQIDTIVFYQVTDPKLYAYGVENPILAIEALSATTLRNILGDLELDTSLTSRDIINTKMRHILDDATDKWGIKV
NRVEVKNIMPPKDIRDSMEKQMRAERERRQTILIAEGEKRAKILEAEGINESIILKAQADKQQVILNAEAQAESIRQLKE
AEALGIKLIKEAAPDAAVLQIKAYEALAKLAEGQATKIVVPSNLADLAGTVTALTEVVQSGKEPTKK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=273, Percent_Identity=35.8974358974359, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI38016911, Length=178, Percent_Identity=35.3932584269663, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI221316744, Length=179, Percent_Identity=35.195530726257, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI21686995, Length=178, Percent_Identity=35.3932584269663, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI7657615, Length=184, Percent_Identity=26.6304347826087, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1786697, Length=300, Percent_Identity=38.3333333333333, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1790616, Length=291, Percent_Identity=26.4604810996564, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32564147, Length=294, Percent_Identity=30.952380952381, Blast_Score=147, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI17569499, Length=201, Percent_Identity=32.8358208955224, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17569493, Length=196, Percent_Identity=31.6326530612245, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI193209764, Length=196, Percent_Identity=31.6326530612245, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25153583, Length=198, Percent_Identity=30.8080808080808, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71987612, Length=200, Percent_Identity=31.5, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI32566490, Length=193, Percent_Identity=31.6062176165803, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71987621, Length=198, Percent_Identity=30.8080808080808, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17569497, Length=218, Percent_Identity=30.2752293577982, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71989948, Length=178, Percent_Identity=33.7078651685393, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71989955, Length=178, Percent_Identity=33.7078651685393, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193210507, Length=199, Percent_Identity=31.1557788944724, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17570161, Length=199, Percent_Identity=31.1557788944724, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17570459, Length=206, Percent_Identity=31.5533980582524, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989963, Length=118, Percent_Identity=29.6610169491525, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI45550506, Length=291, Percent_Identity=34.020618556701, Blast_Score=148, Evalue=5e-36,
Organism=Drosophila melanogaster, GI45556022, Length=203, Percent_Identity=34.9753694581281, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI21356845, Length=195, Percent_Identity=31.2820512820513, Blast_Score=107, Evalue=8e-24,
Organism=Drosophila melanogaster, GI62484448, Length=199, Percent_Identity=33.6683417085427, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI62484274, Length=199, Percent_Identity=33.6683417085427, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24657857, Length=199, Percent_Identity=33.6683417085427, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28573263, Length=198, Percent_Identity=32.3232323232323, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI281365664, Length=199, Percent_Identity=33.6683417085427, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI18860517, Length=198, Percent_Identity=31.3131313131313, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI281361631, Length=194, Percent_Identity=29.8969072164948, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281361633, Length=194, Percent_Identity=29.8969072164948, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281361635, Length=135, Percent_Identity=34.0740740740741, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33924; Mature: 33924

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGQVVLIVLVVVLGVLALLVISGVRIVTQTKKYVVERLGAYHTTWGVGIHWLFPFVDR
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VVSVVSLKEQVKDFDPQAVITKDNVTMQIDTIVFYQVTDPKLYAYGVENPILAIEALSAT
HHHHHHHHHHHHCCCCCEEEEECCEEEEEEEEEEEEECCCEEEEECCCCCEEEEHHHHHH
TLRNILGDLELDTSLTSRDIINTKMRHILDDATDKWGIKVNRVEVKNIMPPKDIRDSMEK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
QMRAERERRQTILIAEGEKRAKILEAEGINESIILKAQADKQQVILNAEAQAESIRQLKE
HHHHHHHHCCEEEEECCCCHHHEEECCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH
AEALGIKLIKEAAPDAAVLQIKAYEALAKLAEGQATKIVVPSNLADLAGTVTALTEVVQS
HHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHC
GKEPTKK
CCCCCCC
>Mature Secondary Structure
MEPGQVVLIVLVVVLGVLALLVISGVRIVTQTKKYVVERLGAYHTTWGVGIHWLFPFVDR
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VVSVVSLKEQVKDFDPQAVITKDNVTMQIDTIVFYQVTDPKLYAYGVENPILAIEALSAT
HHHHHHHHHHHHCCCCCEEEEECCEEEEEEEEEEEEECCCEEEEECCCCCEEEEHHHHHH
TLRNILGDLELDTSLTSRDIINTKMRHILDDATDKWGIKVNRVEVKNIMPPKDIRDSMEK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
QMRAERERRQTILIAEGEKRAKILEAEGINESIILKAQADKQQVILNAEAQAESIRQLKE
HHHHHHHHCCEEEEECCCCHHHEEECCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH
AEALGIKLIKEAAPDAAVLQIKAYEALAKLAEGQATKIVVPSNLADLAGTVTALTEVVQS
HHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHC
GKEPTKK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]