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The map label for this gene is 162447473

Identifier: 162447473

GI number: 162447473

Start: 643160

End: 644287

Strand: Direct

Name: 162447473

Synonym: ACL_0612

Alternate gene names: NA

Gene position: 643160-644287 (Clockwise)

Preceding gene: 162447472

Following gene: 162447474

Centisome position: 42.96

GC content: 35.99

Gene sequence:

>1128_bases
ATGAATTTAGAAAAACGAAGTAATGAAATTAAAGCACGCATCACTGAAATCAAAGGTTTGATTGGTGCTGAAGTAACACT
TGAAGTGTTAGAACAACTAGAAGCTGAAGTTGATGAACTGAATAAAGAAAAAGACACGATTGAAAGAAAACTTGCGATTC
AAAACAAGACAAAAATCAATCCAGTCGTTATTGAAAGATCTAATCAAGTGGATAAAGATCAATTAGAAACTCGTGGTAAG
AATTTAAGAGAAAGCAGAGTCATTCAAGTTTCAAGTGAAGAGATTCTATTACCAGAACACATTGCTGATGGCATTGCACC
ACATCCATTCGCACAAGTATCTGCGTTAGTGGATAAGGTAAAGGTTGTCAATCTAAACGGTGGGGAAACCTACAAGAAAT
CATTTGTCAAAGGTAGTGGCATCGCTGGTTTAACTGGAGAAGGTGAACCTTATTCAGAAACAGAACCAGAGTATGGTTAT
CTAACCATTACTAAAGTTAAAGTGACAGCTTACACAGAAATCACAGAAGAGTTAGAAAAACTACCTAACTTACCATATCA
AGCTGAAGTATTAAAGAACATTAATCTTTCACTTAAAAAGAAGATTAGTGAACAAATCCTAAGAGGACCAGGTACTTCTA
ATACATTCACAGGTATTTTTAGTGATAAAGCAATCGCTCTATCTGACACAACTGATTTAGAAATCACATCGATTACCGAT
TCTACATTAGATGACATCATCTTTGCTTATGGTGGTGATGAAGAAGTCGAAGGTGCCGCATACCTAATCCTTAACAAGAA
TGACCTAAGAGCATTCGCAGGATTACGTACTGCAGAAGGTAGAAAAGTACACACGATTGACTATATTAACAACACGATTG
ATGGTATTCCATACATCATCAATTCTCATTGTAAAGCTATTTCGGATACAAATACTTCAGCTGGAGAATATGGTCTTGCA
TATGGATCCTTACTCAACTATGAAGTACCTGTTTTCTCACCAGTTGAGATCAGTAAGTCTAATGATTACAAATTCAAAGA
TGGCATCATTTGCTACAAGGCTTCCGTATTCACAGGCGGTAACGTTGTAGGGTATAAAGGTTTCTTAAGAGTTAAAAAGA
AAGCCTAA

Upstream 100 bases:

>100_bases
GACTTAGAGCTAAAGACTATGGATTTAGCAGAGAAAAATAAGAAGACTGAACTTATAAGAAAAAAACTAAATTTGAAAAT
AAAAATAGGAGAATAGAAGC

Downstream 100 bases:

>100_bases
GCATCAATAGAATAGAGGTTAGAATATGGGACTACTTGAAACAGTAAAAAAATCATTGCTGATTCCAATCAGCGAGACCT
ATGCTGATGATGAATTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Capsid Protein

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNLEKRSNEIKARITEIKGLIGAEVTLEVLEQLEAEVDELNKEKDTIERKLAIQNKTKINPVVIERSNQVDKDQLETRGK
NLRESRVIQVSSEEILLPEHIADGIAPHPFAQVSALVDKVKVVNLNGGETYKKSFVKGSGIAGLTGEGEPYSETEPEYGY
LTITKVKVTAYTEITEELEKLPNLPYQAEVLKNINLSLKKKISEQILRGPGTSNTFTGIFSDKAIALSDTTDLEITSITD
STLDDIIFAYGGDEEVEGAAYLILNKNDLRAFAGLRTAEGRKVHTIDYINNTIDGIPYIINSHCKAISDTNTSAGEYGLA
YGSLLNYEVPVFSPVEISKSNDYKFKDGIICYKASVFTGGNVVGYKGFLRVKKKA

Sequences:

>Translated_375_residues
MNLEKRSNEIKARITEIKGLIGAEVTLEVLEQLEAEVDELNKEKDTIERKLAIQNKTKINPVVIERSNQVDKDQLETRGK
NLRESRVIQVSSEEILLPEHIADGIAPHPFAQVSALVDKVKVVNLNGGETYKKSFVKGSGIAGLTGEGEPYSETEPEYGY
LTITKVKVTAYTEITEELEKLPNLPYQAEVLKNINLSLKKKISEQILRGPGTSNTFTGIFSDKAIALSDTTDLEITSITD
STLDDIIFAYGGDEEVEGAAYLILNKNDLRAFAGLRTAEGRKVHTIDYINNTIDGIPYIINSHCKAISDTNTSAGEYGLA
YGSLLNYEVPVFSPVEISKSNDYKFKDGIICYKASVFTGGNVVGYKGFLRVKKKA
>Mature_375_residues
MNLEKRSNEIKARITEIKGLIGAEVTLEVLEQLEAEVDELNKEKDTIERKLAIQNKTKINPVVIERSNQVDKDQLETRGK
NLRESRVIQVSSEEILLPEHIADGIAPHPFAQVSALVDKVKVVNLNGGETYKKSFVKGSGIAGLTGEGEPYSETEPEYGY
LTITKVKVTAYTEITEELEKLPNLPYQAEVLKNINLSLKKKISEQILRGPGTSNTFTGIFSDKAIALSDTTDLEITSITD
STLDDIIFAYGGDEEVEGAAYLILNKNDLRAFAGLRTAEGRKVHTIDYINNTIDGIPYIINSHCKAISDTNTSAGEYGLA
YGSLLNYEVPVFSPVEISKSNDYKFKDGIICYKASVFTGGNVVGYKGFLRVKKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41336; Mature: 41336

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEKRSNEIKARITEIKGLIGAEVTLEVLEQLEAEVDELNKEKDTIERKLAIQNKTKIN
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
PVVIERSNQVDKDQLETRGKNLRESRVIQVSSEEILLPEHIADGIAPHPFAQVSALVDKV
EEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCCEECHHHHHCCCCCCCHHHHHHHHHCE
KVVNLNGGETYKKSFVKGSGIAGLTGEGEPYSETEPEYGYLTITKVKVTAYTEITEELEK
EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHH
LPNLPYQAEVLKNINLSLKKKISEQILRGPGTSNTFTGIFSDKAIALSDTTDLEITSITD
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCEEEEECCC
STLDDIIFAYGGDEEVEGAAYLILNKNDLRAFAGLRTAEGRKVHTIDYINNTIDGIPYII
CCHHHEEEEECCCCCCCCEEEEEEECCCHHHHHCCCCCCCCEEEEEHHHHCCCCCCCHHH
NSHCKAISDTNTSAGEYGLAYGSLLNYEVPVFSPVEISKSNDYKFKDGIICYKASVFTGG
HCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCEECCCEEEEEEEEECCC
NVVGYKGFLRVKKKA
CEEEEEEEEEEECCC
>Mature Secondary Structure
MNLEKRSNEIKARITEIKGLIGAEVTLEVLEQLEAEVDELNKEKDTIERKLAIQNKTKIN
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
PVVIERSNQVDKDQLETRGKNLRESRVIQVSSEEILLPEHIADGIAPHPFAQVSALVDKV
EEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCCEECHHHHHCCCCCCCHHHHHHHHHCE
KVVNLNGGETYKKSFVKGSGIAGLTGEGEPYSETEPEYGYLTITKVKVTAYTEITEELEK
EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHH
LPNLPYQAEVLKNINLSLKKKISEQILRGPGTSNTFTGIFSDKAIALSDTTDLEITSITD
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCEEEEECCC
STLDDIIFAYGGDEEVEGAAYLILNKNDLRAFAGLRTAEGRKVHTIDYINNTIDGIPYII
CCHHHEEEEECCCCCCCCEEEEEEECCCHHHHHCCCCCCCCEEEEEHHHHCCCCCCCHHH
NSHCKAISDTNTSAGEYGLAYGSLLNYEVPVFSPVEISKSNDYKFKDGIICYKASVFTGG
HCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCEECCCEEEEEEEEECCC
NVVGYKGFLRVKKKA
CEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA