| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is srmB1 [H]
Identifier: 162447297
GI number: 162447297
Start: 450953
End: 452596
Strand: Direct
Name: srmB1 [H]
Synonym: ACL_0432
Alternate gene names: 162447297
Gene position: 450953-452596 (Clockwise)
Preceding gene: 162447296
Following gene: 162447298
Centisome position: 30.12
GC content: 32.79
Gene sequence:
>1644_bases ATGGCAATTTTATTTAACGATTTACCAATATTAGATACAACAAAAGTAGCATTAGAAAAATTAGGTTTTACTGAAGCTAC ACCAATACAGGAACAAGCAATTCCAAAGATGATTTTAGGTTTAGACTTAATCGGTCAAGCTCAAACAGGAACAGGAAAGA CATTTGCTTTTGGCATACCGATGGTCGAAAAAACTGATACATCCTTAAGACAAACTCAAGGTTTAATTTTAACTCCAACT AGAGAATTAACAAATCAAGTGTACAAAGAGATTATTAAATTAGTGAAGTTTTACCCAGAATTAAGAGTTACAACCATCGT TGGTGGTGAGTCCTATGAAAAACAATTCAAGGAACTAGACAGAAAACCACATATCATTGTTGCAACACCAGGACGTATTA TTGATCATATCGATCGAGGTACAGTGGATTTATCACACATTACAACACTTACATTAGATGAAGCTGATGAAATGTTAAAA ATGGGTTTCCAAGATGATATCGAACGCATTCTACAAACAACACCAGAAACACGTCAAACTGTATTATTTTCTGCAACAAT GCCAGCATTTATTAAAAAGATAGCTAAAAACTATCAAAAAAATCCTGAGCTTATTAAAATTGAAGCAAAAAGTTTAACAG TTGATCGTATTACTCAAGCTTACTTCTTAGTTAAAGAAAAAGAAAAACAAAGTTTATTAGAACGTCTATTAGATTTTGAA AATCCATCAACTGCAATTATTTTTGTGAATACAAAAGCAGGTGCGGATAGAATTACTGAAAGTTTACAAAAAGCAGGATT TACTGCGGATGCACTTCATGGTGACTTAAAACAATCACAACGTACATACGTTATGAATCGTTTTAGAAGTAAACAACTAT CTATCTTAGTAGCAACAGACGTTGCAGCTAGAGGGTTAGACGTTGATGATGTTGAAATTATTGTAAACTATGATTTACCT CAACAAGATGAAATCTATGTTCACCGTATTGGCCGTACAGGTCGTGCTGGTAAAAAAGGTAAAGCATTCACATTTGTTAC ACCACTTAAACGTCGTATGTTAGATATGTTAGCTCACTACACTAAAGCAGATATTAAACGCTTAGAAGTGCCAACAGCTG ATGATGTTTACAAAGAACAACTTAAAACATTTAAACATAAAATTAAAACTGAACTAGCAAATGAATATCCAAACCATTTA GAAGCTATTAAAGAATTATTAGTGGATGAAGGTTCTAAGGATCAACTATTAAATTACTTACTAGACAGCATGCTGCCTAC TAAAAAAACTTACGAAACAATTGAAATCATTCCTGAAAAAGCATCAAGAAGAAGTCAAGATGAAAGAGGAAATGACAAAG GTAGAAAAGATTCAAGATCATCAAGAGATGCTTCACCAGCTCGTGGCAGTGGCCAATATGTTGACTTCACTCTAAATATC GGTAAAGCAGATGGACTAACACCTCCGACACTATTTAAATTCATGGAAAAAGAATATGGTATCTTCTCTAAAAATATTGG CGATATTAGACACCATAAAAACGAAACAGTTTTCGGACTTAGAAAAGATTCTGTAAGACGTCTTAATGCAAAAAAAGAAG TGAATTATAAAGGTAGAAAAGTAGTTATCAAAACATTAAACTAA
Upstream 100 bases:
>100_bases ATGTGAAAATCATCTTTTTTTGTAAATATGCATAAAAATGAGTGGCATCATGGTATACTTGATAAGGTTCAAAAAACGAA AAAGAAATAAGGGATACTAA
Downstream 100 bases:
>100_bases ATAGCACATTCGTGCTATTTTTTTTGTTATACATATATCAGATGTGATTACCGAGGTATAAAAGACTGTTCATAATCAGG CCTTCTTTTAATGGATAATT
Product: DEAD box ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MAILFNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIPMVEKTDTSLRQTQGLILTPT RELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKELDRKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLK MGFQDDIERILQTTPETRQTVLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLDFE NPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVATDVAARGLDVDDVEIIVNYDLP QQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLAHYTKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHL EAIKELLVDEGSKDQLLNYLLDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARGSGQYVDFTLNI GKADGLTPPTLFKFMEKEYGIFSKNIGDIRHHKNETVFGLRKDSVRRLNAKKEVNYKGRKVVIKTLN
Sequences:
>Translated_547_residues MAILFNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIPMVEKTDTSLRQTQGLILTPT RELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKELDRKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLK MGFQDDIERILQTTPETRQTVLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLDFE NPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVATDVAARGLDVDDVEIIVNYDLP QQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLAHYTKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHL EAIKELLVDEGSKDQLLNYLLDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARGSGQYVDFTLNI GKADGLTPPTLFKFMEKEYGIFSKNIGDIRHHKNETVFGLRKDSVRRLNAKKEVNYKGRKVVIKTLN >Mature_546_residues AILFNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIPMVEKTDTSLRQTQGLILTPTR ELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKELDRKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKM GFQDDIERILQTTPETRQTVLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLDFEN PSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVATDVAARGLDVDDVEIIVNYDLPQ QDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLAHYTKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHLE AIKELLVDEGSKDQLLNYLLDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARGSGQYVDFTLNIG KADGLTPPTLFKFMEKEYGIFSKNIGDIRHHKNETVFGLRKDSVRRLNAKKEVNYKGRKVVIKTLN
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=372, Percent_Identity=38.9784946236559, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI7661920, Length=354, Percent_Identity=39.5480225988701, Blast_Score=261, Evalue=2e-69, Organism=Homo sapiens, GI41327771, Length=367, Percent_Identity=39.7820163487738, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI148613856, Length=335, Percent_Identity=40.5970149253731, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI38201710, Length=335, Percent_Identity=40.5970149253731, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI4758138, Length=340, Percent_Identity=39.7058823529412, Blast_Score=247, Evalue=3e-65, Organism=Homo sapiens, GI222352149, Length=338, Percent_Identity=41.1242603550296, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI41327773, Length=340, Percent_Identity=41.4705882352941, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI301171475, Length=395, Percent_Identity=36.4556962025316, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI87196351, Length=395, Percent_Identity=36.4556962025316, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI301171467, Length=395, Percent_Identity=36.4556962025316, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI31542656, Length=363, Percent_Identity=37.1900826446281, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=37.7005347593583, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=37.7005347593583, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI224593278, Length=458, Percent_Identity=34.2794759825328, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI45446747, Length=342, Percent_Identity=37.719298245614, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI45446743, Length=342, Percent_Identity=37.719298245614, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI50659095, Length=397, Percent_Identity=37.0277078085642, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI169881239, Length=380, Percent_Identity=36.8421052631579, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI13514809, Length=380, Percent_Identity=36.8421052631579, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI13129006, Length=398, Percent_Identity=36.6834170854271, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=35.7142857142857, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI55749865, Length=388, Percent_Identity=36.0824742268041, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI21071032, Length=349, Percent_Identity=38.6819484240688, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI164664518, Length=343, Percent_Identity=32.9446064139942, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=35.933147632312, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=35.933147632312, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=35.933147632312, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=35.933147632312, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI51094101, Length=333, Percent_Identity=35.7357357357357, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI164419743, Length=333, Percent_Identity=35.7357357357357, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI4758112, Length=334, Percent_Identity=34.1317365269461, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI18375623, Length=334, Percent_Identity=34.1317365269461, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI21040371, Length=334, Percent_Identity=33.5329341317365, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=35.9459459459459, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI41327776, Length=372, Percent_Identity=34.1397849462366, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI6005743, Length=370, Percent_Identity=35.4054054054054, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=35.4054054054054, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI62241024, Length=347, Percent_Identity=35.4466858789625, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI41327779, Length=388, Percent_Identity=32.2164948453608, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=34.1463414634146, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI256223453, Length=377, Percent_Identity=31.0344827586207, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI38569503, Length=351, Percent_Identity=33.9031339031339, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38569505, Length=351, Percent_Identity=33.9031339031339, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI38327634, Length=346, Percent_Identity=33.8150289017341, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI17505907, Length=421, Percent_Identity=29.2161520190024, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI9506931, Length=371, Percent_Identity=29.3800539083558, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI9966805, Length=306, Percent_Identity=32.6797385620915, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI154759257, Length=449, Percent_Identity=27.1714922048998, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI4826686, Length=341, Percent_Identity=29.6187683284457, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI256773275, Length=360, Percent_Identity=26.9444444444444, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI20336298, Length=201, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI4557365, Length=366, Percent_Identity=21.8579234972678, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI87082221, Length=533, Percent_Identity=37.1482176360225, Blast_Score=340, Evalue=1e-94, Organism=Escherichia coli, GI1787605, Length=345, Percent_Identity=43.4782608695652, Blast_Score=313, Evalue=2e-86, Organism=Escherichia coli, GI1787016, Length=361, Percent_Identity=39.8891966759003, Blast_Score=262, Evalue=4e-71, Organism=Escherichia coli, GI1790214, Length=354, Percent_Identity=38.9830508474576, Blast_Score=234, Evalue=8e-63, Organism=Escherichia coli, GI1788930, Length=358, Percent_Identity=37.9888268156425, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI48994977, Length=368, Percent_Identity=23.0978260869565, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=37.1967654986523, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI71995724, Length=354, Percent_Identity=38.7005649717514, Blast_Score=258, Evalue=8e-69, Organism=Caenorhabditis elegans, GI17507121, Length=354, Percent_Identity=38.4180790960452, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI32565321, Length=372, Percent_Identity=38.7096774193548, Blast_Score=255, Evalue=5e-68, Organism=Caenorhabditis elegans, GI17555296, Length=340, Percent_Identity=40.2941176470588, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=41.3173652694611, Blast_Score=251, Evalue=5e-67, Organism=Caenorhabditis elegans, GI86570094, Length=390, Percent_Identity=38.974358974359, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71995718, Length=397, Percent_Identity=36.5239294710327, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=38.3152173913043, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=38.3152173913043, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=38.4615384615385, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI115532548, Length=430, Percent_Identity=34.1860465116279, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI115532546, Length=377, Percent_Identity=35.8090185676393, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI71999646, Length=337, Percent_Identity=36.4985163204748, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI71999644, Length=337, Percent_Identity=36.4985163204748, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17552114, Length=333, Percent_Identity=33.6336336336336, Blast_Score=223, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17537549, Length=346, Percent_Identity=36.7052023121387, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507945, Length=340, Percent_Identity=37.6470588235294, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17552642, Length=354, Percent_Identity=34.7457627118644, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17510559, Length=438, Percent_Identity=30.365296803653, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71982858, Length=334, Percent_Identity=32.9341317365269, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=34.0425531914894, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI193206561, Length=409, Percent_Identity=31.2958435207824, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=33.7837837837838, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17509811, Length=353, Percent_Identity=30.8781869688385, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17507881, Length=376, Percent_Identity=32.1808510638298, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=33.5064935064935, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17505370, Length=341, Percent_Identity=32.258064516129, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=31.5789473684211, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI193208216, Length=369, Percent_Identity=32.7913279132791, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=31.5789473684211, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17536103, Length=380, Percent_Identity=31.5789473684211, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=33.245382585752, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17553716, Length=329, Percent_Identity=31.0030395136778, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=31.4666666666667, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17508543, Length=343, Percent_Identity=28.5714285714286, Blast_Score=151, Evalue=9e-37, Organism=Caenorhabditis elegans, GI25148203, Length=401, Percent_Identity=25.6857855361596, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17556951, Length=359, Percent_Identity=28.133704735376, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI25148291, Length=412, Percent_Identity=24.7572815533981, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71997889, Length=369, Percent_Identity=25.7452574525745, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI25148205, Length=326, Percent_Identity=24.8466257668712, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71982862, Length=191, Percent_Identity=30.8900523560209, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71987152, Length=108, Percent_Identity=44.4444444444444, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17566630, Length=339, Percent_Identity=24.7787610619469, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI25145561, Length=345, Percent_Identity=22.8985507246377, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321856, Length=345, Percent_Identity=42.3188405797101, Blast_Score=259, Evalue=6e-70, Organism=Saccharomyces cerevisiae, GI6321360, Length=347, Percent_Identity=40.0576368876081, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=39.5604395604396, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=335, Percent_Identity=39.4029850746269, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=36.7521367521368, Blast_Score=239, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=342, Percent_Identity=39.4736842105263, Blast_Score=236, Evalue=8e-63, Organism=Saccharomyces cerevisiae, GI6321963, Length=346, Percent_Identity=39.8843930635838, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6322912, Length=344, Percent_Identity=40.406976744186, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6322323, Length=344, Percent_Identity=40.406976744186, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=347, Percent_Identity=35.7348703170029, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6320041, Length=325, Percent_Identity=36.3076923076923, Blast_Score=224, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6320449, Length=411, Percent_Identity=34.5498783454988, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6320119, Length=348, Percent_Identity=32.4712643678161, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320173, Length=400, Percent_Identity=31.75, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=378, Percent_Identity=33.5978835978836, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=32.5966850828729, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=34.6049046321526, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=365, Percent_Identity=33.4246575342466, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=32.8804347826087, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=32.360097323601, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=339, Percent_Identity=35.1032448377581, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=380, Percent_Identity=30, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=404, Percent_Identity=29.2079207920792, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=419, Percent_Identity=26.7303102625298, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=25.4237288135593, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6321374, Length=375, Percent_Identity=25.8666666666667, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=41.9718309859155, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=38.0053908355795, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=41.8604651162791, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24584994, Length=364, Percent_Identity=38.1868131868132, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=39.5778364116095, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24585582, Length=346, Percent_Identity=36.7052023121387, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=36.9272237196765, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=36.9272237196765, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=36.9272237196765, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=36.9272237196765, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI18857967, Length=348, Percent_Identity=39.6551724137931, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=37.5706214689266, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=37.5706214689266, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=37.5706214689266, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=37.5706214689266, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=37.5706214689266, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=37.5706214689266, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=37.5706214689266, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24662330, Length=342, Percent_Identity=40.3508771929825, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24584399, Length=344, Percent_Identity=37.7906976744186, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI21355075, Length=341, Percent_Identity=38.1231671554252, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24583281, Length=326, Percent_Identity=34.9693251533742, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24583279, Length=326, Percent_Identity=34.9693251533742, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI17136814, Length=352, Percent_Identity=37.2159090909091, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI28575014, Length=335, Percent_Identity=34.3283582089552, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI21356161, Length=390, Percent_Identity=34.6153846153846, Blast_Score=215, Evalue=8e-56, Organism=Drosophila melanogaster, GI17977678, Length=339, Percent_Identity=37.4631268436578, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=39.8089171974522, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24581954, Length=335, Percent_Identity=33.4328358208955, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24581952, Length=335, Percent_Identity=33.4328358208955, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24581956, Length=335, Percent_Identity=33.4328358208955, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI21355559, Length=398, Percent_Identity=32.4120603015075, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI28571808, Length=348, Percent_Identity=33.0459770114943, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI28571809, Length=348, Percent_Identity=33.0459770114943, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=30.6179775280899, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI18859659, Length=415, Percent_Identity=30.6024096385542, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI28571338, Length=415, Percent_Identity=30.6024096385542, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24642822, Length=392, Percent_Identity=29.8469387755102, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=32.033426183844, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24643725, Length=380, Percent_Identity=28.9473684210526, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI24668515, Length=334, Percent_Identity=31.437125748503, Blast_Score=156, Evalue=5e-38, Organism=Drosophila melanogaster, GI20130173, Length=311, Percent_Identity=31.1897106109325, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI19920478, Length=361, Percent_Identity=28.808864265928, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI17136666, Length=411, Percent_Identity=26.0340632603406, Blast_Score=117, Evalue=3e-26, Organism=Drosophila melanogaster, GI24640164, Length=337, Percent_Identity=25.2225519287834, Blast_Score=103, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 62124; Mature: 61993
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILFNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIP CEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC MVEKTDTSLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKELD CCCCCCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHC RKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPETRQT CCCEEEEECCCHHHHHCCCCCEEHHHEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCHHHE VLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLDFE EEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC NPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVATD CCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC VAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLAHY HHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH TKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHLEAIKELLVDEGSKDQLLNYL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH LDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARGSGQYVDFTLNI HHHHCCCCHHHHHHHCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE GKADGLTPPTLFKFMEKEYGIFSKNIGDIRHHKNETVFGLRKDSVRRLNAKKEVNYKGRK CCCCCCCCHHHHHHHHHHCCCHHCCCHHHHHCCCCCEEEECHHHHHHHCCHHCCCCCCCE VVIKTLN EEEEECC >Mature Secondary Structure AILFNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIP EEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC MVEKTDTSLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKELD CCCCCCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHC RKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPETRQT CCCEEEEECCCHHHHHCCCCCEEHHHEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCHHHE VLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLDFE EEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC NPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVATD CCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC VAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLAHY HHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH TKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHLEAIKELLVDEGSKDQLLNYL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH LDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARGSGQYVDFTLNI HHHHCCCCHHHHHHHCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE GKADGLTPPTLFKFMEKEYGIFSKNIGDIRHHKNETVFGLRKDSVRRLNAKKEVNYKGRK CCCCCCCCHHHHHHHHHHCCCHHCCCHHHHHCCCCCEEEECHHHHHHHCCHHCCCCCCCE VVIKTLN EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]