Click here to switch to the map view.

The map label for this gene is ypjC [H]

Identifier: 162447198

GI number: 162447198

Start: 344160

End: 345029

Strand: Direct

Name: ypjC [H]

Synonym: ACL_0332

Alternate gene names: 162447198

Gene position: 344160-345029 (Clockwise)

Preceding gene: 162447197

Following gene: 162447199

Centisome position: 22.99

GC content: 31.15

Gene sequence:

>870_bases
ATGAATAAAGAAATGATTAAATCATATGCACTCATTACTCTAGGCGTATTTTTACTACATTTAGCATTTTACTTTTTTAT
GCAACCAATGGGTTTAATCACAGGTGGTATGATGGGACTTAGTTTAATGCTTGAACCATTAATTCCATTTTCTACAGGTA
TTACCTATCTCATGTTAAATATTGTAGCACTTACAATTGGCGGTATTTTATTTGGTAAAGATTTCTTTTTAAAGACTGTA
TTTGCAAGTATTTTGTCACCTGTTTTAGTGACATTATTTGAAGTTTTAAAGATAGAAGATACACTTATACTAAATCAAAT
TGATCTACACTATCAACTCTTAGTAGCTAGTATTGCTAGTGGGGTATTAGCTGGTGTGGGTATTGGTCTAGTCTTAAGAT
ATAATGCAACCACAGGTGGTATGGATATCTTTCAAAAGATTATCAATAAATATTTAAAAGTACCATTTTCAGTTGCAGTT
TATCTAACCGATGGTTTAATTATTTTACTTGGTGCATTTATAAGTCTACAAAATGGGTTATTTGCTATTTTAGCTATGTT
ATTAACAGCATATATGTTAGAAAAAACAGCGATATTTGGAAGAAACGCCTTTGCACTGATGATTATTACCAAAAAACATG
ATGAGATTAAAGAAGCAATTTATGAACGTATAGACAGAGGTGTAACAAGATTAAAAGCTATTGGTGGCTACTCTGGTATT
GAAAAAGAATTAGTACTTACTACGATGAATCGCCAACAACTCTATATTGCTAAAGAGTTTATTACACAAATAGATCCAAA
CGCATTTACACTCATTATCTCAACAAAAGAAGTATTAGGTGAAGGTTTTCACCGTGACGATCTCACATGA

Upstream 100 bases:

>100_bases
GTCAAAGACCACAGAACTAATTATGAAGTTGGTAATATTCAGTCTGTCATGGATGGAGATATTGACGGTTTCATTAATGC
TTATTTAAAGAGTAAAGCCT

Downstream 100 bases:

>100_bases
TAGTCAAAGAGGTTAGAAAACTTAAAACCAATTACCAAGTTGAATTTCAAAATGGTTATAAGTTAACAATTGATGAAGAT
ACGTTAGTCCAATATAGATT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNKEMIKSYALITLGVFLLHLAFYFFMQPMGLITGGMMGLSLMLEPLIPFSTGITYLMLNIVALTIGGILFGKDFFLKTV
FASILSPVLVTLFEVLKIEDTLILNQIDLHYQLLVASIASGVLAGVGIGLVLRYNATTGGMDIFQKIINKYLKVPFSVAV
YLTDGLIILLGAFISLQNGLFAILAMLLTAYMLEKTAIFGRNAFALMIITKKHDEIKEAIYERIDRGVTRLKAIGGYSGI
EKELVLTTMNRQQLYIAKEFITQIDPNAFTLIISTKEVLGEGFHRDDLT

Sequences:

>Translated_289_residues
MNKEMIKSYALITLGVFLLHLAFYFFMQPMGLITGGMMGLSLMLEPLIPFSTGITYLMLNIVALTIGGILFGKDFFLKTV
FASILSPVLVTLFEVLKIEDTLILNQIDLHYQLLVASIASGVLAGVGIGLVLRYNATTGGMDIFQKIINKYLKVPFSVAV
YLTDGLIILLGAFISLQNGLFAILAMLLTAYMLEKTAIFGRNAFALMIITKKHDEIKEAIYERIDRGVTRLKAIGGYSGI
EKELVLTTMNRQQLYIAKEFITQIDPNAFTLIISTKEVLGEGFHRDDLT
>Mature_289_residues
MNKEMIKSYALITLGVFLLHLAFYFFMQPMGLITGGMMGLSLMLEPLIPFSTGITYLMLNIVALTIGGILFGKDFFLKTV
FASILSPVLVTLFEVLKIEDTLILNQIDLHYQLLVASIASGVLAGVGIGLVLRYNATTGGMDIFQKIINKYLKVPFSVAV
YLTDGLIILLGAFISLQNGLFAILAMLLTAYMLEKTAIFGRNAFALMIITKKHDEIKEAIYERIDRGVTRLKAIGGYSGI
EKELVLTTMNRQQLYIAKEFITQIDPNAFTLIISTKEVLGEGFHRDDLT

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 32040; Mature: 32040

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEMIKSYALITLGVFLLHLAFYFFMQPMGLITGGMMGLSLMLEPLIPFSTGITYLMLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IVALTIGGILFGKDFFLKTVFASILSPVLVTLFEVLKIEDTLILNQIDLHYQLLVASIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLAGVGIGLVLRYNATTGGMDIFQKIINKYLKVPFSVAVYLTDGLIILLGAFISLQNGL
HHHHHHCHHEEEEECCCCCCHHHHHHHHHHHHCCCHHEEHHHHCCHHHHHHHHHHHCCCH
FAILAMLLTAYMLEKTAIFGRNAFALMIITKKHDEIKEAIYERIDRGVTRLKAIGGYSGI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EKELVLTTMNRQQLYIAKEFITQIDPNAFTLIISTKEVLGEGFHRDDLT
CHHHHEEECCCHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKEMIKSYALITLGVFLLHLAFYFFMQPMGLITGGMMGLSLMLEPLIPFSTGITYLMLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IVALTIGGILFGKDFFLKTVFASILSPVLVTLFEVLKIEDTLILNQIDLHYQLLVASIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLAGVGIGLVLRYNATTGGMDIFQKIINKYLKVPFSVAVYLTDGLIILLGAFISLQNGL
HHHHHHCHHEEEEECCCCCCHHHHHHHHHHHHCCCHHEEHHHHCCHHHHHHHHHHHCCCH
FAILAMLLTAYMLEKTAIFGRNAFALMIITKKHDEIKEAIYERIDRGVTRLKAIGGYSGI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EKELVLTTMNRQQLYIAKEFITQIDPNAFTLIISTKEVLGEGFHRDDLT
CHHHHEEECCCHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]