| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is 162447104
Identifier: 162447104
GI number: 162447104
Start: 227633
End: 229699
Strand: Direct
Name: 162447104
Synonym: ACL_0234
Alternate gene names: NA
Gene position: 227633-229699 (Clockwise)
Preceding gene: 162447103
Following gene: 162447105
Centisome position: 15.21
GC content: 31.16
Gene sequence:
>2067_bases ATGCTGTCTTTTTTTAATCTACTTATGAATATTGCTATTTTATGGACCAATGAAGTGATTTTAATGCCTATTGGAGCATC ACTGGATAAGTATAAGAATTTGCCCGAGGCTACTTTATATGTAAATGATGAAGTTGCAGTAGATAAATTAATGTATTATG AATATGAAATCAACTACACAAGTTTTAGCGTCATTAGAACCCATGTAGTAGGTACGTACACGGTTTGGTACCGAGCGCAC TTTCCTACCTTAGGATTTGAAAGTGAAGTAGCTATTACTTTTATTGTCAAGGATACGATGCCACCAACGATAACTGGTCC TATGGATTTTTATGTAGATGTTGGAACTAAATCCATTGATTATAAAACACTTATTAACTATACAGATAACTATACGGTAG ATAAGGATTTAATTTTAAACATCTATGCTGGTCAAGTGAACTTGAATCAACTGGGTAGTTATCAAGTGACATACAGTGTA AAAGATAAAGCATTTAATGAATCGATTTGGGTAACAACTATCCATGTAGTAGATAATGTAAAACCCGTAATCAAGCAAAA AGCGGGTATCACAATTTTAATAGGAGAGGCCTTAAATTTAGATAAGTTTTTTACCTTTAGTGATAACTATGACACTGTGC TTGATGTAAGTTATGATGATACATTGATCCACTATCAAAATCCCGGAAGCTATCCTTTATCAGTTACTGTAAAAGATCAA TCAGGAAATGAAGTCACTGTAGATGTTCAAGTACAAGTAGTCGACACAACAAGTCCGGTTATTGTATTAAAAACGAACAA TATAAAGGTAAATTACTTAACCGACCTCACTAATGATTATCTAAGGTCCTTTATCATAGATGTTAAAGATAATGTGGATA GTTTAAACATAGAAGATGTTTTAATAACAAGCTACATCGATACCCACATACTTGGTAAATATGAAGTGATTTATAACATA AGAGATTCAAATAGCTTAATAGGAGAAGCAAAACTTGCTGTTGAAGTTATAGATAACGAAGCACCTAAAGTAAGTATGAG AGAAGATATTTATGTTGATGTACATAGTTTAGAGCCATATATTTATGACTACTTAATCATTGAAGATAACTACAACAAAT TAGAAGATTTAACAATCACTAAAACAGGAAGTATCACGATGTCAAAGTTGGGTGCTTACCGGGTCATTATAAAAGTAGTT GATCAAGCAAAAAATGTGGCAGAGTATCCAGTGATTGTAAACGTCATTGACCAGATAGCACCAGTCTTAAAAGTACCTAG TGAACTTATGATAACAAACTTTTTAAGACCGGACTATCTAAAAATAATCGAAGTCAAAGACAATTATGATAAGGATATAG TAGTTATCATAGAAGATGCTGATATGAACTATAAAGAGCTTGGTGAACACCAAGTTACAATACGTGCTATAGATAGTTCT TTAAATGAAACAGTAGAACACATAGTGATTAAAATCATTGATTTAAGTTATCCTGAAATTATTTTAAAGACACATCAGGT ATATCTTCCTTACGGTGTAGATAGTGTTGACTATCTATCGTATGTAGAAAGTGTGTTTGACAGTTATGATAAAGATTTAT CTATCTTTGATATAAAATATAAGTCTACTTTAGATTTTAATAAAGTGGGCTTATATCAGGTGATATATGAGTTAACTGAT AAATCGAATAATGTAGGAACACAACTACTTTATATCTACTTAACTGATTTTGAAAAACCAGTGATTGAAGCAACCCATAT CACCATCAAAAAAGGTGCATACTTTAACTATAAAGATCATGTAACTGCTTATGATAACTATGATGGTGATATATCTAATT TAGTTAAAATGAACCCGCAATTTGTACCTATCCAACAAGTGGGTTACTATGAAATACTATTTTATGTACATGATTCATCC GGAAATTACTCAGAAATTAAAGTCTTACTCACCATAGAAGCTACAAATGATGTAATGGATTACATATATTATATTGTTGG TGGTGTAATTATTTTAGGTAGTATCATAATTTACTACATATACATCAAAAAACGTGAAAATATCTAG
Upstream 100 bases:
>100_bases TAGAAGAAAAATCAAAAGTTTATGAAGCTGAAATGAATAAACTATAAAATAAAAGTAAAAAGACAGTATGTTTCCTACTA TATAATAGGAGGTAAAAAAC
Downstream 100 bases:
>100_bases TATTTTTAGTATAATATGAACTAGTATAATAATGAATGTAGAAAGTGTGTATGATATGGCAATTTTAGTTGTATACTGGA CCGGAACAGGGAATACAGAA
Product: ABC transporter lipoprotein
Products: NA
Alternate protein names: Cell Wall Associated Biofilm Protein; C Protein Alpha-Antigen; Peptidoglycan Linked Protein; Surface Protein; Secreted Protein
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MLSFFNLLMNIAILWTNEVILMPIGASLDKYKNLPEATLYVNDEVAVDKLMYYEYEINYTSFSVIRTHVVGTYTVWYRAH FPTLGFESEVAITFIVKDTMPPTITGPMDFYVDVGTKSIDYKTLINYTDNYTVDKDLILNIYAGQVNLNQLGSYQVTYSV KDKAFNESIWVTTIHVVDNVKPVIKQKAGITILIGEALNLDKFFTFSDNYDTVLDVSYDDTLIHYQNPGSYPLSVTVKDQ SGNEVTVDVQVQVVDTTSPVIVLKTNNIKVNYLTDLTNDYLRSFIIDVKDNVDSLNIEDVLITSYIDTHILGKYEVIYNI RDSNSLIGEAKLAVEVIDNEAPKVSMREDIYVDVHSLEPYIYDYLIIEDNYNKLEDLTITKTGSITMSKLGAYRVIIKVV DQAKNVAEYPVIVNVIDQIAPVLKVPSELMITNFLRPDYLKIIEVKDNYDKDIVVIIEDADMNYKELGEHQVTIRAIDSS LNETVEHIVIKIIDLSYPEIILKTHQVYLPYGVDSVDYLSYVESVFDSYDKDLSIFDIKYKSTLDFNKVGLYQVIYELTD KSNNVGTQLLYIYLTDFEKPVIEATHITIKKGAYFNYKDHVTAYDNYDGDISNLVKMNPQFVPIQQVGYYEILFYVHDSS GNYSEIKVLLTIEATNDVMDYIYYIVGGVIILGSIIIYYIYIKKRENI
Sequences:
>Translated_688_residues MLSFFNLLMNIAILWTNEVILMPIGASLDKYKNLPEATLYVNDEVAVDKLMYYEYEINYTSFSVIRTHVVGTYTVWYRAH FPTLGFESEVAITFIVKDTMPPTITGPMDFYVDVGTKSIDYKTLINYTDNYTVDKDLILNIYAGQVNLNQLGSYQVTYSV KDKAFNESIWVTTIHVVDNVKPVIKQKAGITILIGEALNLDKFFTFSDNYDTVLDVSYDDTLIHYQNPGSYPLSVTVKDQ SGNEVTVDVQVQVVDTTSPVIVLKTNNIKVNYLTDLTNDYLRSFIIDVKDNVDSLNIEDVLITSYIDTHILGKYEVIYNI RDSNSLIGEAKLAVEVIDNEAPKVSMREDIYVDVHSLEPYIYDYLIIEDNYNKLEDLTITKTGSITMSKLGAYRVIIKVV DQAKNVAEYPVIVNVIDQIAPVLKVPSELMITNFLRPDYLKIIEVKDNYDKDIVVIIEDADMNYKELGEHQVTIRAIDSS LNETVEHIVIKIIDLSYPEIILKTHQVYLPYGVDSVDYLSYVESVFDSYDKDLSIFDIKYKSTLDFNKVGLYQVIYELTD KSNNVGTQLLYIYLTDFEKPVIEATHITIKKGAYFNYKDHVTAYDNYDGDISNLVKMNPQFVPIQQVGYYEILFYVHDSS GNYSEIKVLLTIEATNDVMDYIYYIVGGVIILGSIIIYYIYIKKRENI >Mature_688_residues MLSFFNLLMNIAILWTNEVILMPIGASLDKYKNLPEATLYVNDEVAVDKLMYYEYEINYTSFSVIRTHVVGTYTVWYRAH FPTLGFESEVAITFIVKDTMPPTITGPMDFYVDVGTKSIDYKTLINYTDNYTVDKDLILNIYAGQVNLNQLGSYQVTYSV KDKAFNESIWVTTIHVVDNVKPVIKQKAGITILIGEALNLDKFFTFSDNYDTVLDVSYDDTLIHYQNPGSYPLSVTVKDQ SGNEVTVDVQVQVVDTTSPVIVLKTNNIKVNYLTDLTNDYLRSFIIDVKDNVDSLNIEDVLITSYIDTHILGKYEVIYNI RDSNSLIGEAKLAVEVIDNEAPKVSMREDIYVDVHSLEPYIYDYLIIEDNYNKLEDLTITKTGSITMSKLGAYRVIIKVV DQAKNVAEYPVIVNVIDQIAPVLKVPSELMITNFLRPDYLKIIEVKDNYDKDIVVIIEDADMNYKELGEHQVTIRAIDSS LNETVEHIVIKIIDLSYPEIILKTHQVYLPYGVDSVDYLSYVESVFDSYDKDLSIFDIKYKSTLDFNKVGLYQVIYELTD KSNNVGTQLLYIYLTDFEKPVIEATHITIKKGAYFNYKDHVTAYDNYDGDISNLVKMNPQFVPIQQVGYYEILFYVHDSS GNYSEIKVLLTIEATNDVMDYIYYIVGGVIILGSIIIYYIYIKKRENI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78827; Mature: 78827
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFFNLLMNIAILWTNEVILMPIGASLDKYKNLPEATLYVNDEVAVDKLMYYEYEINYT CCHHHHHHHEEEEEEECCEEEEEECCCHHHHCCCCCEEEEECCCCEEEEEEEEEEEECCE SFSVIRTHVVGTYTVWYRAHFPTLGFESEVAITFIVKDTMPPTITGPMDFYVDVGTKSID EEEEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCEECCEEEEEECCCCCCC YKTLINYTDNYTVDKDLILNIYAGQVNLNQLGSYQVTYSVKDKAFNESIWVTTIHVVDNV EEEEEECCCCEEECCEEEEEEEECEEEHHHCCCEEEEEEECCCCCCCEEEEEEEEEECCC KPVIKQKAGITILIGEALNLDKFFTFSDNYDTVLDVSYDDTLIHYQNPGSYPLSVTVKDQ HHHHHCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEEECC SGNEVTVDVQVQVVDTTSPVIVLKTNNIKVNYLTDLTNDYLRSFIIDVKDNVDSLNIEDV CCCEEEEEEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHHHHEEEECCCCCCCCCCCE LITSYIDTHILGKYEVIYNIRDSNSLIGEAKLAVEVIDNEAPKVSMREDIYVDVHSLEPY EEEEHHHHHCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCEEECCEEEEEEECCCCE IYDYLIIEDNYNKLEDLTITKTGSITMSKLGAYRVIIKVVDQAKNVAEYPVIVNVIDQIA EEEEEEEECCCCCCCEEEEEECCCEEHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH PVLKVPSELMITNFLRPDYLKIIEVKDNYDKDIVVIIEDADMNYKELGEHQVTIRAIDSS HHHHCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHCCCEEEEEEEEHHH LNETVEHIVIKIIDLSYPEIILKTHQVYLPYGVDSVDYLSYVESVFDSYDKDLSIFDIKY HHHHHHHEEEEEECCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEE KSTLDFNKVGLYQVIYELTDKSNNVGTQLLYIYLTDFEKPVIEATHITIKKGAYFNYKDH ECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEECCCCC VTAYDNYDGDISNLVKMNPQFVPIQQVGYYEILFYVHDSSGNYSEIKVLLTIEATNDVMD EEEECCCCCCHHHHHHCCCCEEEHHHCCEEEEEEEEECCCCCEEEEEEEEEEECCHHHHH YIYYIVGGVIILGSIIIYYIYIKKRENI HHHHHHHHHHHHHHHEEEEEEEEECCCC >Mature Secondary Structure MLSFFNLLMNIAILWTNEVILMPIGASLDKYKNLPEATLYVNDEVAVDKLMYYEYEINYT CCHHHHHHHEEEEEEECCEEEEEECCCHHHHCCCCCEEEEECCCCEEEEEEEEEEEECCE SFSVIRTHVVGTYTVWYRAHFPTLGFESEVAITFIVKDTMPPTITGPMDFYVDVGTKSID EEEEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCEECCEEEEEECCCCCCC YKTLINYTDNYTVDKDLILNIYAGQVNLNQLGSYQVTYSVKDKAFNESIWVTTIHVVDNV EEEEEECCCCEEECCEEEEEEEECEEEHHHCCCEEEEEEECCCCCCCEEEEEEEEEECCC KPVIKQKAGITILIGEALNLDKFFTFSDNYDTVLDVSYDDTLIHYQNPGSYPLSVTVKDQ HHHHHCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEEECC SGNEVTVDVQVQVVDTTSPVIVLKTNNIKVNYLTDLTNDYLRSFIIDVKDNVDSLNIEDV CCCEEEEEEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHHHHEEEECCCCCCCCCCCE LITSYIDTHILGKYEVIYNIRDSNSLIGEAKLAVEVIDNEAPKVSMREDIYVDVHSLEPY EEEEHHHHHCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCEEECCEEEEEEECCCCE IYDYLIIEDNYNKLEDLTITKTGSITMSKLGAYRVIIKVVDQAKNVAEYPVIVNVIDQIA EEEEEEEECCCCCCCEEEEEECCCEEHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH PVLKVPSELMITNFLRPDYLKIIEVKDNYDKDIVVIIEDADMNYKELGEHQVTIRAIDSS HHHHCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHCCCEEEEEEEEHHH LNETVEHIVIKIIDLSYPEIILKTHQVYLPYGVDSVDYLSYVESVFDSYDKDLSIFDIKY HHHHHHHEEEEEECCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEE KSTLDFNKVGLYQVIYELTDKSNNVGTQLLYIYLTDFEKPVIEATHITIKKGAYFNYKDH ECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEECCCCC VTAYDNYDGDISNLVKMNPQFVPIQQVGYYEILFYVHDSSGNYSEIKVLLTIEATNDVMD EEEECCCCCCHHHHHHCCCCEEEHHHCCEEEEEEEEECCCCCEEEEEEEEEEECCHHHHH YIYYIVGGVIILGSIIIYYIYIKKRENI HHHHHHHHHHHHHHHEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA