| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is yddW [H]
Identifier: 162447051
GI number: 162447051
Start: 171148
End: 173868
Strand: Direct
Name: yddW [H]
Synonym: ACL_0181
Alternate gene names: 162447051
Gene position: 171148-173868 (Clockwise)
Preceding gene: 162447050
Following gene: 162447052
Centisome position: 11.43
GC content: 31.97
Gene sequence:
>2721_bases ATGAAGATCAAAAAAACAATAATTATCATACTAGTATGTTTAACCACTATACTATTATCAGGATTTACAAAGCCAAATTC AAATGATATAAAATCATTTGAATTTGAGTTTGAAACCAATCAAAAATTAAGAGCAGTCTGGGTTACACCAATTGTAGGAG AAGTCTCTACATTTACAACTGAAACTGCCTTTAAAAATGAAATGAATCAGATGTTAGATATCTTAGAACATTACAAAATA AATGCACTTATCTTTCATGTTAGAACACATAACAATGCTTTATATGATTCAGAATTAAATCCTAAAGCAACCGTTTTTGG TAGTGTTAATTTTAATAATTTTGACCCTTTATTATGGCTAGTTAATGAAACTCAAAGCCGTGGTATTGAGTTTCATGCAT GGCTAAATCCTTATAGAGTGGGAACTAATTATGTAGGCACAATGCCTGCAGAAAACCCCGCATCAAATGCTAGTAACATA TTAAGTAATCCATCGAATTCGGCACTTAAGATATTAAACCCTGGAGAACCTGTTGTACGTGATTTTATAGTTGATACTGT AATAGAAATTATTGAAAAGTACCCTGTAGATGCAATCCATTTTGATGATTACTTTTACACTAATTTAGGGGCTAACGGAG CACTTTCTGGTGCAACCACCATTCTAGATGAACCCGATCAGCAAACATATGTAACTTATGGTAGTGGATTTAATACAACG AGTGCTACTGATAAAGCAAATTGGCGTAGACACCAAGTTAATACCATGGTTCAGGCCGTATCTAATGCGATAAAAAATTA TAACCAGTTAAATGGTAAGCATATACAATTTGGTATATCACCTACGGGGATATACAAAAATGGGAATGGTGTAGTAACTT ATGATGAGTTTGGTAAACCAGTTACAACAGGATCTCTTACTACTGGTCAAACACATTATAGTTCTTATCTATTTTCAGAC TCGCTTCACTGGATAAAAGAAGGCTGGTTAGATTATATTGCCCCACAAAGCTATTGGGCAACAAATCACAGTGCAGCATC CTACTATAATGTAATGGGCTGGTGGGAAAAAGTAGTTAAATATTTGGACGTTAATCTCTATTCTGGTATTGGTCTATATA TGGCAGATGAATCGACAAATACCTTTAACTGGAAAGATGATATGTTAGAGATGCGTACTCAATTAGAATATTTAGAGACA CTTAATGATGTAGATGGATTAAGTGTATACTCATATAAATATATTAGAAATCACTATAACAATCAAAATTCTACTTCAGC AAATCAAATGGAAAATGCAGCTCACTTATGGCAAGATTATTTAGTTTTACCACCACTTAAAAGTATGGAACCCATACTTT TAGATGGTGTATCTAATATCTTGCATGAAAATGGGGTATTAACCTTTGATAGACTGGATGGTGCCAAACAGTATTACATA TATAGATCACAAACTAGCCTAACATATAGCCAATCTGAAATTGTAGGTGTTGTTGGTAGAAGTAATGATTTAAGTTTATC TTATAATACAGGCGATATCCAAAATCAATATGTATATGGGATTCGAGCACTATCCTATACAAATCATTTAGGTAGTACCA CAGTAACTAATGATATTTCAATGATTGAGGGGGCATCGATTAGGCTTGCTACCGAATCAAGTGGACAAGGCTTAAGATTT TATGCAAATAAACCTCAATCTGTTTTAAGTGATACACATGGATTTTATATTGTTTATGGTGAGACCACAAGGCAAGATTT ATTAGATGCAATAAACAATCCTATAAATAATGAAATTATAGTAAATCAAAAGAAGGTATTTAAAGTTGAAGTGCCTGATG TTGAAGTAGATGGAACGTATTCGGTAGTAATTACTGGTATACCAAGTATAGGATATACTCAAAAGATAAGTGTATATGCT TATTACACAAATAATCAACAAACCTATATATCTTCTAATGCCTCTATAAGATCACTACTTGAAGTAGCGGTTCGAATGGA AAATCTAGATCAGGGTGTTACTCAGAGCAAAGATATTATTAATGAGGTTAAAGACTCAACAAAGCATATCGTAAGAAATG CTTTTAATGCATATGAAATTACTGGTATTTTTGAAACGAACCACAATCTAATAAAAGCAGAATTTATTAAAGATTGGAAC ACTTTATTTCAAACTAACTGGACAGAACTAAATGCACAAGACTTTTATAACCATGCAATTGTAGGTAAACTATCTGGTGC TGAAACGCTTGCTGGTAGTAGATTATATCAGTTCTTTAATCACACAAATTATCAATTAAAATGGGCATGGTTATTAGATT ATCTACTAAGTATTGATGGTACTGTTTGGACTTCAAGACAAATAGAAGCTATTAAACTAGATGGTACATTTGAGTCATAC ACTAATTTATATAGTGGTAATCATCTGATTTATTCTATCTATAATTTCTTTTATGAATCACATGTGGTAGGTGGATATAC TGCAATTAATTTCGTTACTAATAAGCAATTTTATGATACAGTAGTTAATTTTAGTAATAGTATCTATTTAAAACTAGATA ACTATGATTTCTTAAGTGTAGGTCAATCAATTAAACTTCCTAATCCACCGGCTGATTTATCAGCAAACTTTTCACATTAC CTGATTGGGTCCACAACATATTATCCAGGGGATAACTATGTTGTTACAAGTAATACAAAAATTAAATTTATGTATCAGTA A
Upstream 100 bases:
>100_bases TAGAAACTATCTTAACTAAAACACCAATATATAAAATGGGTTGTACAATATCCAAAGAAGCCGCATTAATGTCGTATAAC ACTATGAAAGGGCAGACACT
Downstream 100 bases:
>100_bases AATCACCGAAGGTATAGATGTAAAAAATAATACATTTATACCTTTTTCTAGTGATATGAAATTAGAAACTTTGAATTGTA AGTGATTTATTATAAAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 906; Mature: 906
Protein sequence:
>906_residues MKIKKTIIIILVCLTTILLSGFTKPNSNDIKSFEFEFETNQKLRAVWVTPIVGEVSTFTTETAFKNEMNQMLDILEHYKI NALIFHVRTHNNALYDSELNPKATVFGSVNFNNFDPLLWLVNETQSRGIEFHAWLNPYRVGTNYVGTMPAENPASNASNI LSNPSNSALKILNPGEPVVRDFIVDTVIEIIEKYPVDAIHFDDYFYTNLGANGALSGATTILDEPDQQTYVTYGSGFNTT SATDKANWRRHQVNTMVQAVSNAIKNYNQLNGKHIQFGISPTGIYKNGNGVVTYDEFGKPVTTGSLTTGQTHYSSYLFSD SLHWIKEGWLDYIAPQSYWATNHSAASYYNVMGWWEKVVKYLDVNLYSGIGLYMADESTNTFNWKDDMLEMRTQLEYLET LNDVDGLSVYSYKYIRNHYNNQNSTSANQMENAAHLWQDYLVLPPLKSMEPILLDGVSNILHENGVLTFDRLDGAKQYYI YRSQTSLTYSQSEIVGVVGRSNDLSLSYNTGDIQNQYVYGIRALSYTNHLGSTTVTNDISMIEGASIRLATESSGQGLRF YANKPQSVLSDTHGFYIVYGETTRQDLLDAINNPINNEIIVNQKKVFKVEVPDVEVDGTYSVVITGIPSIGYTQKISVYA YYTNNQQTYISSNASIRSLLEVAVRMENLDQGVTQSKDIINEVKDSTKHIVRNAFNAYEITGIFETNHNLIKAEFIKDWN TLFQTNWTELNAQDFYNHAIVGKLSGAETLAGSRLYQFFNHTNYQLKWAWLLDYLLSIDGTVWTSRQIEAIKLDGTFESY TNLYSGNHLIYSIYNFFYESHVVGGYTAINFVTNKQFYDTVVNFSNSIYLKLDNYDFLSVGQSIKLPNPPADLSANFSHY LIGSTTYYPGDNYVVTSNTKIKFMYQ
Sequences:
>Translated_906_residues MKIKKTIIIILVCLTTILLSGFTKPNSNDIKSFEFEFETNQKLRAVWVTPIVGEVSTFTTETAFKNEMNQMLDILEHYKI NALIFHVRTHNNALYDSELNPKATVFGSVNFNNFDPLLWLVNETQSRGIEFHAWLNPYRVGTNYVGTMPAENPASNASNI LSNPSNSALKILNPGEPVVRDFIVDTVIEIIEKYPVDAIHFDDYFYTNLGANGALSGATTILDEPDQQTYVTYGSGFNTT SATDKANWRRHQVNTMVQAVSNAIKNYNQLNGKHIQFGISPTGIYKNGNGVVTYDEFGKPVTTGSLTTGQTHYSSYLFSD SLHWIKEGWLDYIAPQSYWATNHSAASYYNVMGWWEKVVKYLDVNLYSGIGLYMADESTNTFNWKDDMLEMRTQLEYLET LNDVDGLSVYSYKYIRNHYNNQNSTSANQMENAAHLWQDYLVLPPLKSMEPILLDGVSNILHENGVLTFDRLDGAKQYYI YRSQTSLTYSQSEIVGVVGRSNDLSLSYNTGDIQNQYVYGIRALSYTNHLGSTTVTNDISMIEGASIRLATESSGQGLRF YANKPQSVLSDTHGFYIVYGETTRQDLLDAINNPINNEIIVNQKKVFKVEVPDVEVDGTYSVVITGIPSIGYTQKISVYA YYTNNQQTYISSNASIRSLLEVAVRMENLDQGVTQSKDIINEVKDSTKHIVRNAFNAYEITGIFETNHNLIKAEFIKDWN TLFQTNWTELNAQDFYNHAIVGKLSGAETLAGSRLYQFFNHTNYQLKWAWLLDYLLSIDGTVWTSRQIEAIKLDGTFESY TNLYSGNHLIYSIYNFFYESHVVGGYTAINFVTNKQFYDTVVNFSNSIYLKLDNYDFLSVGQSIKLPNPPADLSANFSHY LIGSTTYYPGDNYVVTSNTKIKFMYQ >Mature_906_residues MKIKKTIIIILVCLTTILLSGFTKPNSNDIKSFEFEFETNQKLRAVWVTPIVGEVSTFTTETAFKNEMNQMLDILEHYKI NALIFHVRTHNNALYDSELNPKATVFGSVNFNNFDPLLWLVNETQSRGIEFHAWLNPYRVGTNYVGTMPAENPASNASNI LSNPSNSALKILNPGEPVVRDFIVDTVIEIIEKYPVDAIHFDDYFYTNLGANGALSGATTILDEPDQQTYVTYGSGFNTT SATDKANWRRHQVNTMVQAVSNAIKNYNQLNGKHIQFGISPTGIYKNGNGVVTYDEFGKPVTTGSLTTGQTHYSSYLFSD SLHWIKEGWLDYIAPQSYWATNHSAASYYNVMGWWEKVVKYLDVNLYSGIGLYMADESTNTFNWKDDMLEMRTQLEYLET LNDVDGLSVYSYKYIRNHYNNQNSTSANQMENAAHLWQDYLVLPPLKSMEPILLDGVSNILHENGVLTFDRLDGAKQYYI YRSQTSLTYSQSEIVGVVGRSNDLSLSYNTGDIQNQYVYGIRALSYTNHLGSTTVTNDISMIEGASIRLATESSGQGLRF YANKPQSVLSDTHGFYIVYGETTRQDLLDAINNPINNEIIVNQKKVFKVEVPDVEVDGTYSVVITGIPSIGYTQKISVYA YYTNNQQTYISSNASIRSLLEVAVRMENLDQGVTQSKDIINEVKDSTKHIVRNAFNAYEITGIFETNHNLIKAEFIKDWN TLFQTNWTELNAQDFYNHAIVGKLSGAETLAGSRLYQFFNHTNYQLKWAWLLDYLLSIDGTVWTSRQIEAIKLDGTFESY TNLYSGNHLIYSIYNFFYESHVVGGYTAINFVTNKQFYDTVVNFSNSIYLKLDNYDFLSVGQSIKLPNPPADLSANFSHY LIGSTTYYPGDNYVVTSNTKIKFMYQ
Specific function: Unknown
COG id: COG1649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0748 family [H]
Homologues:
Organism=Escherichia coli, GI1787767, Length=442, Percent_Identity=29.4117647058824, Blast_Score=188, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003790 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02638 DUF187 [H]
EC number: NA
Molecular weight: Translated: 102769; Mature: 102769
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKTIIIILVCLTTILLSGFTKPNSNDIKSFEFEFETNQKLRAVWVTPIVGEVSTFTT CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHH ETAFKNEMNQMLDILEHYKINALIFHVRTHNNALYDSELNPKATVFGSVNFNNFDPLLWL HHHHHHHHHHHHHHHHHCEEEEEEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCEEEE VNETQSRGIEFHAWLNPYRVGTNYVGTMPAENPASNASNILSNPSNSALKILNPGEPVVR EECHHHCCEEEEEECCEEECCCCCEECCCCCCCCCCHHHHHCCCCCCEEEEECCCCHHHH DFIVDTVIEIIEKYPVDAIHFDDYFYTNLGANGALSGATTILDEPDQQTYVTYGSGFNTT HHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCEEECCCCCCCEEEEECCCCCCC SATDKANWRRHQVNTMVQAVSNAIKNYNQLNGKHIQFGISPTGIYKNGNGVVTYDEFGKP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEEEECCCCCE VTTGSLTTGQTHYSSYLFSDSLHWIKEGWLDYIAPQSYWATNHSAASYYNVMGWWEKVVK EECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH YLDVNLYSGIGLYMADESTNTFNWKDDMLEMRTQLEYLETLNDVDGLSVYSYKYIRNHYN HHCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHCC NQNSTSANQMENAAHLWQDYLVLPPLKSMEPILLDGVSNILHENGVLTFDRLDGAKQYYI CCCCCCHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEE YRSQTSLTYSQSEIVGVVGRSNDLSLSYNTGDIQNQYVYGIRALSYTNHLGSTTVTNDIS EECCCCEEECCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEECCHH MIEGASIRLATESSGQGLRFYANKPQSVLSDTHGFYIVYGETTRQDLLDAINNPINNEII HCCCCEEEEEECCCCCCEEEECCCCHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCEE VNQKKVFKVEVPDVEVDGTYSVVITGIPSIGYTQKISVYAYYTNNQQTYISSNASIRSLL EECCEEEEEECCCEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCEEEEECCHHHHHHH EVAVRMENLDQGVTQSKDIINEVKDSTKHIVRNAFNAYEITGIFETNHNLIKAEFIKDWN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHH TLFQTNWTELNAQDFYNHAIVGKLSGAETLAGSRLYQFFNHTNYQLKWAWLLDYLLSIDG HHHHCCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCC TVWTSRQIEAIKLDGTFESYTNLYSGNHLIYSIYNFFYESHVVGGYTAINFVTNKQFYDT CEEECCCEEEEEECCCHHHHHHHCCCCCCEEHHHHHHHHCCCCCCEEEEEEEECCHHHHH VVNFSNSIYLKLDNYDFLSVGQSIKLPNPPADLSANFSHYLIGSTTYYPGDNYVVTSNTK HHCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCEEEECCCE IKFMYQ EEEEEC >Mature Secondary Structure MKIKKTIIIILVCLTTILLSGFTKPNSNDIKSFEFEFETNQKLRAVWVTPIVGEVSTFTT CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHH ETAFKNEMNQMLDILEHYKINALIFHVRTHNNALYDSELNPKATVFGSVNFNNFDPLLWL HHHHHHHHHHHHHHHHHCEEEEEEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCEEEE VNETQSRGIEFHAWLNPYRVGTNYVGTMPAENPASNASNILSNPSNSALKILNPGEPVVR EECHHHCCEEEEEECCEEECCCCCEECCCCCCCCCCHHHHHCCCCCCEEEEECCCCHHHH DFIVDTVIEIIEKYPVDAIHFDDYFYTNLGANGALSGATTILDEPDQQTYVTYGSGFNTT HHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCEEECCCCCCCEEEEECCCCCCC SATDKANWRRHQVNTMVQAVSNAIKNYNQLNGKHIQFGISPTGIYKNGNGVVTYDEFGKP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEEEECCCCCE VTTGSLTTGQTHYSSYLFSDSLHWIKEGWLDYIAPQSYWATNHSAASYYNVMGWWEKVVK EECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH YLDVNLYSGIGLYMADESTNTFNWKDDMLEMRTQLEYLETLNDVDGLSVYSYKYIRNHYN HHCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHCC NQNSTSANQMENAAHLWQDYLVLPPLKSMEPILLDGVSNILHENGVLTFDRLDGAKQYYI CCCCCCHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEE YRSQTSLTYSQSEIVGVVGRSNDLSLSYNTGDIQNQYVYGIRALSYTNHLGSTTVTNDIS EECCCCEEECCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEECCHH MIEGASIRLATESSGQGLRFYANKPQSVLSDTHGFYIVYGETTRQDLLDAINNPINNEII HCCCCEEEEEECCCCCCEEEECCCCHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCEE VNQKKVFKVEVPDVEVDGTYSVVITGIPSIGYTQKISVYAYYTNNQQTYISSNASIRSLL EECCEEEEEECCCEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCEEEEECCHHHHHHH EVAVRMENLDQGVTQSKDIINEVKDSTKHIVRNAFNAYEITGIFETNHNLIKAEFIKDWN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHH TLFQTNWTELNAQDFYNHAIVGKLSGAETLAGSRLYQFFNHTNYQLKWAWLLDYLLSIDG HHHHCCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCC TVWTSRQIEAIKLDGTFESYTNLYSGNHLIYSIYNFFYESHVVGGYTAINFVTNKQFYDT CEEECCCEEEEEECCCHHHHHHHCCCCCCEEHHHHHHHHCCCCCCEEEEEEEECCHHHHH VVNFSNSIYLKLDNYDFLSVGQSIKLPNPPADLSANFSHYLIGSTTYYPGDNYVVTSNTK HHCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCEEEECCCE IKFMYQ EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]