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The map label for this gene is rpmC

Identifier: 162446965

GI number: 162446965

Start: 88534

End: 88722

Strand: Direct

Name: rpmC

Synonym: ACL_0095

Alternate gene names: 162446965

Gene position: 88534-88722 (Clockwise)

Preceding gene: 162446964

Following gene: 162446966

Centisome position: 5.91

GC content: 32.8

Gene sequence:

>189_bases
GTGAAAGCAGCTGATATCAGAAATTTAGATTCAAATCAAATTCATAACAAAATTGCTGAATTAAAAGCTGAATTATTCAA
TTTACGCTTTCAGCACGCTGTTGGTCAATTAGAAAACACAGCAAGATTAAGAACTGTTAAAAAGACTATCGCTCAAATGA
AAACAATCATTTCTGAGCGTGGCGAGTAA

Upstream 100 bases:

>100_bases
AAATTAACGGTGTAAGTGAAGCGACTGCTAGAGAAGCTCTTCGTAAAGCAGGTCACAAATTACCTATTAAAGTTAAAATT
GTCAAGAGAGGTGAAGAAGC

Downstream 100 bases:

>100_bases
GAGAGGATATGACAATGGAACAAGTTAAAAATAAAAAACTTTATACTGGAAAAGTTGTATCTGACAAAATGGATAAAACC
ATTACTGTACAAGTGGAAAC

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MKAADIRNLDSNQIHNKIAELKAELFNLRFQHAVGQLENTARLRTVKKTIAQMKTIISERGE

Sequences:

>Translated_62_residues
MKAADIRNLDSNQIHNKIAELKAELFNLRFQHAVGQLENTARLRTVKKTIAQMKTIISERGE
>Mature_62_residues
MKAADIRNLDSNQIHNKIAELKAELFNLRFQHAVGQLENTARLRTVKKTIAQMKTIISERGE

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_ACHLI (A9NEE1)

Other databases:

- EMBL:   CP000896
- RefSeq:   YP_001620097.1
- ProteinModelPortal:   A9NEE1
- SMR:   A9NEE1
- GeneID:   5804147
- GenomeReviews:   CP000896_GR
- KEGG:   acl:ACL_0095
- HOGENOM:   HBG730819
- OMA:   LENTSRM
- BioCyc:   ALAI441768:ACL_0095-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7104; Mature: 7104

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAADIRNLDSNQIHNKIAELKAELFNLRFQHAVGQLENTARLRTVKKTIAQMKTIISER
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GE
CC
>Mature Secondary Structure
MKAADIRNLDSNQIHNKIAELKAELFNLRFQHAVGQLENTARLRTVKKTIAQMKTIISER
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA