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The map label for this gene is 162421483

Identifier: 162421483

GI number: 162421483

Start: 2391137

End: 2391694

Strand: Direct

Name: 162421483

Synonym: YpAngola_A2282

Alternate gene names: NA

Gene position: 2391137-2391694 (Clockwise)

Preceding gene: 162421916

Following gene: 162419755

Centisome position: 53.09

GC content: 47.85

Gene sequence:

>558_bases
ATGAAATCATTAACCCCGCAGTTACTTAATGGCCAACAACTTCATGACCAGTTACAGCAGGTAACACAAGGTATCGACCA
AGCGATTGATTGGGTTAAGAGTACCCGCCAACATGCTGTTCGTTTGGATAGAGAAGCCGAACACTTAACCATTAAGTTAC
GCCGTATGCGTAATAAAGCGCACCCTCTATCTGAGACCGCGCTAACCGCGATGACTATTGGTTTTGTGGGGCAATCACAG
GCGGGGAAAAAACACCTTATCTCGGCACTGGCGGCCAATGAACATGGCCGATTGGAAAACACGCTCGGGGGGAAAAAACT
CGACTTTTGGCAACAAATTAGGCCGGAATATCAAACAACGGGCTTGGTTACTCGCTTTAGCTATCAGACAGAAGGTCATC
AAACGCACGGTCATGAAAGCAGAGCAACAAATGAAGCCTATCCGGTTCAGCTCACCTTACTCAGCGAAGTAGATATCGCC
AAAATCATCTCCCGTGCTTTCTTGCTGGATTGCCCTCAGGAAAATCCAGCTTATTGTGCCCAGAAAACCCCCAGCTAG

Upstream 100 bases:

>100_bases
GTGTGCCCTTGCATCATCTGCGACTTAAATTGAACACATTAGCCAGCAATGGCTCAGGATCCCCCCATTATTGGATCGAC
AGCGGGAGCGTATTTAGAAA

Downstream 100 bases:

>100_bases
GCTGGGGGTTCAGTAAAGCTTTCAGCTTTGGGTCAGTTATAAAAACCCCTTTTGATTTGTTAAAACAGTTTGCGGTCTGG
CAACTGCAAATGTTCAACAA

Product: virulence factor

Products: NA

Alternate protein names: Virulence Effector SrfC; Virulence Factor SrfC-Like Protein; Virulence Factor SrfC; Virulence Factor Protein; Type III Secretion System Effector; HopL1 Protein; Protein Conserved In Bacteria Virulence Factor; Virulence Protein; Type III Effector Protein; Coiled-Coil Structure

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGQSQ
AGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIISRAFLLDCPQENPAYCAQKTPS

Sequences:

>Translated_185_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGQSQ
AGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIISRAFLLDCPQENPAYCAQKTPS
>Mature_185_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGQSQ
AGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIISRAFLLDCPQENPAYCAQKTPS

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20833; Mature: 20833

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALTAMTIGFVGQSQAGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIISRAFLLDCPQENPAYCA
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCC
QKTPS
CCCCC
>Mature Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALTAMTIGFVGQSQAGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIISRAFLLDCPQENPAYCA
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCC
QKTPS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA