| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is 162421017
Identifier: 162421017
GI number: 162421017
Start: 1523575
End: 1524171
Strand: Direct
Name: 162421017
Synonym: YpAngola_A1471
Alternate gene names: NA
Gene position: 1523575-1524171 (Clockwise)
Preceding gene: 162421442
Following gene: 162418678
Centisome position: 33.83
GC content: 51.59
Gene sequence:
>597_bases ATGAGTGATGTCAGTGGGCAAATCTCAACTCTATACCGACAGATAAAAATGCTGCTGGGGATCGGGCGGGTGACCGCTTT TGACGACAGCAACGGAGTGCAAACCGTGCAATATCAAACCCCGTTGGAAGTCCACAGCGATACGCCAAGGTTAGCTGAAT TTGGTTTCTCGTCGGGATTGCCGGCGGGCAGTGATGTGGTCATTGGTTTCCTGGGGGGGGATCGTTCCAGCGGGATGATC ATCGCCTCACATCATCCGGCCTATCGGCATATGGGGCTCAATGTAGGTGAAACGGTGATTTACGCCCAGTGGGGGCAATT TATCAAACTGACCGAGAGTGGGGTGGTGATTGAGGCTAACAACCAGCCGGTGACCGTCAATAATGCGACAGAGGTGACCG TAAATGCCACGGTAAAAGTACGGTTAAATACGCCGTTGCTTGAGGTAAGCGGCAATATCATTGATAACGCTGACAGTAAT AGCGCCACGCTAAAAAGCTTACGTGACGCCTACAACAGCCACAATCATCAACTTAAAAACGTCCAGTCGGGCAGTACGAC ACTTACCAGTGAAACGCCCGCTAAGGTGGTGCGATGA
Upstream 100 bases:
>100_bases TCAGAAAGATGCAAAAGGAACGGTGGCAAATATGGTCTTGATGCCACCCGCTGCATTTGACGTTAAGCCCTATAAAATCA AATGAAACAAGGGGTTAACC
Downstream 100 bases:
>100_bases CAACCGATATTAAGACCGTTTGGGATGTAAATGCCTTGCTGGGGGATTGGCAGACCGGTAACGGCGGCTTACTGGAGGGT GATGACTTGCAGACGGCTAT
Product: phage baseplate assembly protein
Products: NA
Alternate protein names: Bacteriophage Mu; Baseplate Assembly Protein; Baseplate Assembly Mu-Like; Phage Baseplate Assembly Protein; Baseplate Assembly Phage Protein; Bacteriophage Protein
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSDVSGQISTLYRQIKMLLGIGRVTAFDDSNGVQTVQYQTPLEVHSDTPRLAEFGFSSGLPAGSDVVIGFLGGDRSSGMI IASHHPAYRHMGLNVGETVIYAQWGQFIKLTESGVVIEANNQPVTVNNATEVTVNATVKVRLNTPLLEVSGNIIDNADSN SATLKSLRDAYNSHNHQLKNVQSGSTTLTSETPAKVVR
Sequences:
>Translated_198_residues MSDVSGQISTLYRQIKMLLGIGRVTAFDDSNGVQTVQYQTPLEVHSDTPRLAEFGFSSGLPAGSDVVIGFLGGDRSSGMI IASHHPAYRHMGLNVGETVIYAQWGQFIKLTESGVVIEANNQPVTVNNATEVTVNATVKVRLNTPLLEVSGNIIDNADSN SATLKSLRDAYNSHNHQLKNVQSGSTTLTSETPAKVVR >Mature_197_residues SDVSGQISTLYRQIKMLLGIGRVTAFDDSNGVQTVQYQTPLEVHSDTPRLAEFGFSSGLPAGSDVVIGFLGGDRSSGMII ASHHPAYRHMGLNVGETVIYAQWGQFIKLTESGVVIEANNQPVTVNNATEVTVNATVKVRLNTPLLEVSGNIIDNADSNS ATLKSLRDAYNSHNHQLKNVQSGSTTLTSETPAKVVR
Specific function: Unknown
COG id: COG4384
COG function: function code S; Mu-like prophage protein gp45
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21241; Mature: 21110
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVSGQISTLYRQIKMLLGIGRVTAFDDSNGVQTVQYQTPLEVHSDTPRLAEFGFSSGL CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCEECCCCCHHHHCCCCCCC PAGSDVVIGFLGGDRSSGMIIASHHPAYRHMGLNVGETVIYAQWGQFIKLTESGVVIEAN CCCCCEEEEEECCCCCCCEEEEECCCHHHHCCCCCCCEEEEEECCCEEEEECCCEEEECC NQPVTVNNATEVTVNATVKVRLNTPLLEVSGNIIDNADSNSATLKSLRDAYNSHNHQLKN CCEEEECCCEEEEEEEEEEEEECCCEEEECCCEECCCCCCHHHHHHHHHHHHCCCCEEEE VQSGSTTLTSETPAKVVR CCCCCEEECCCCCHHHCC >Mature Secondary Structure SDVSGQISTLYRQIKMLLGIGRVTAFDDSNGVQTVQYQTPLEVHSDTPRLAEFGFSSGL CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCEECCCCCHHHHCCCCCCC PAGSDVVIGFLGGDRSSGMIIASHHPAYRHMGLNVGETVIYAQWGQFIKLTESGVVIEAN CCCCCEEEEEECCCCCCCEEEEECCCHHHHCCCCCCCEEEEEECCCEEEEECCCEEEECC NQPVTVNNATEVTVNATVKVRLNTPLLEVSGNIIDNADSNSATLKSLRDAYNSHNHQLKN CCEEEECCCEEEEEEEEEEEEECCCEEEECCCEECCCCCCHHHHHHHHHHHHCCCCEEEE VQSGSTTLTSETPAKVVR CCCCCEEECCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA