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The map label for this gene is pcp1 [H]

Identifier: 162420901

GI number: 162420901

Start: 1267136

End: 1267603

Strand: Direct

Name: pcp1 [H]

Synonym: YpAngola_A1219

Alternate gene names: 162420901

Gene position: 1267136-1267603 (Clockwise)

Preceding gene: 162421477

Following gene: 162420218

Centisome position: 28.13

GC content: 54.49

Gene sequence:

>468_bases
ATGAATAAGCTGGCCATTGCCGTTGCACTTGCCGCCACCGTATTAAGCGGATGTGCCAATAACACTGCGTCTGGTGATAC
TTTTACTGCCTCTCAGGCACGACAAGTACAGACCGTCACTTACGGCTCGATAGTGTCTGCCCGCCCGGTCACCATTCAGG
GCGGCAATAATAATAATGTTGCCGGTGCCATTGGCGGTGCCGTAGTGGGTGGATTCTTAGGGAATACTATTGGCGGTGGC
CGTGGTAATAGCTTGGCAACTGCAGGTGGTGCCGTTGCTGGTGGCGTAGCAGGCCAGGGTATCCAGAGTGCGATGAACCG
CAGTGAAGGGGTTCAACTGGAAATTCGCCGTGATGATGGCAGCAATATTGTTGTTGTACAGGCTCAGGGGCCTACCCGTT
TCAGTGCTGGCCAACGCGTGATAATCGCCAGTGATCGTAGCGGTACCGTCACGGTTTCTCCTCGCTAA

Upstream 100 bases:

>100_bases
ATTCGAGTTGCAGGAAGGCGGACAACGCACAGGCAACTTGAAATATGACAGATATATAAGCTGAATGAATTCTGACTTGC
ACTGAGGAAAGGGGTTGATT

Downstream 100 bases:

>100_bases
ACGTAGCAACCGGGGGGCACGTTAACCCCAGTTTTCAGTCTGTAGGCTGATAGCCCATGCCTACGGACTGGTTATCAAAT
GCCGTAGTCGTTAAAGCCGG

Product: outer membrane lipoprotein PcP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNKLAIAVALAATVLSGCANNTASGDTFTASQARQVQTVTYGSIVSARPVTIQGGNNNNVAGAIGGAVVGGFLGNTIGGG
RGNSLATAGGAVAGGVAGQGIQSAMNRSEGVQLEIRRDDGSNIVVVQAQGPTRFSAGQRVIIASDRSGTVTVSPR

Sequences:

>Translated_155_residues
MNKLAIAVALAATVLSGCANNTASGDTFTASQARQVQTVTYGSIVSARPVTIQGGNNNNVAGAIGGAVVGGFLGNTIGGG
RGNSLATAGGAVAGGVAGQGIQSAMNRSEGVQLEIRRDDGSNIVVVQAQGPTRFSAGQRVIIASDRSGTVTVSPR
>Mature_155_residues
MNKLAIAVALAATVLSGCANNTASGDTFTASQARQVQTVTYGSIVSARPVTIQGGNNNNVAGAIGGAVVGGFLGNTIGGG
RGNSLATAGGAVAGGVAGQGIQSAMNRSEGVQLEIRRDDGSNIVVVQAQGPTRFSAGQRVIIASDRSGTVTVSPR

Specific function: Facilitates ferrioxamine uptake [H]

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=156, Percent_Identity=66.6666666666667, Blast_Score=169, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15212; Mature: 15212

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLAIAVALAATVLSGCANNTASGDTFTASQARQVQTVTYGSIVSARPVTIQGGNNNNV
CCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEECCEECCCCEEEECCCCCCE
AGAIGGAVVGGFLGNTIGGGRGNSLATAGGAVAGGVAGQGIQSAMNRSEGVQLEIRRDDG
EEHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCCCCHHHHHHHCCCCCEEEEEEECCC
SNIVVVQAQGPTRFSAGQRVIIASDRSGTVTVSPR
CCEEEEECCCCCCCCCCCEEEEEECCCCEEEECCC
>Mature Secondary Structure
MNKLAIAVALAATVLSGCANNTASGDTFTASQARQVQTVTYGSIVSARPVTIQGGNNNNV
CCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEECCEECCCCEEEECCCCCCE
AGAIGGAVVGGFLGNTIGGGRGNSLATAGGAVAGGVAGQGIQSAMNRSEGVQLEIRRDDG
EEHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCCCCHHHHHHHCCCCCEEEEEEECCC
SNIVVVQAQGPTRFSAGQRVIIASDRSGTVTVSPR
CCEEEEECCCCCCCCCCCEEEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732192 [H]