| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is 162420822
Identifier: 162420822
GI number: 162420822
Start: 2588151
End: 2588339
Strand: Direct
Name: 162420822
Synonym: YpAngola_A2470
Alternate gene names: NA
Gene position: 2588151-2588339 (Clockwise)
Preceding gene: 162418978
Following gene: 162420305
Centisome position: 57.46
GC content: 42.86
Gene sequence:
>189_bases ATGCCTAAAATGCCTCTTACTCCCGAACAGCGAATTAAAGAACTTGAACAGCAACTCGCTGAATCAGAAGTCAAAGCTCA TTTTTTTGAAGCTGTTGTGAAGGTAATGAACACGGAGTTCGGAGCCACACTAACAAAAAAGCAGTTGGCCACATTATCAC GCAAGCACAAACGCAAGGACTCACAGTAA
Upstream 100 bases:
>100_bases TTACGGTATTCAAGGCTGCTCTACCGTCTTGAAGTGGCTACGCAAGTACGGTCAACTCGACTGGTCTTCCCCCTCTTCTA CAAGAACGTGCAGAGCTAAC
Downstream 100 bases:
>100_bases CGCGCGCGTGCCGGTTCATGGGGATTAGCCGACAGGCGTGGTATCAGTCTTTGCAGCGGGAACGCGGAAGAGAAATACAG GCCCAAAGTATCGTTGAACA
Product: IS3 family transposase orfA
Products: NA
Alternate protein names: ISVisp4 Transposase OrfA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MPKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNTEFGATLTKKQLATLSRKHKRKDSQ
Sequences:
>Translated_62_residues MPKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNTEFGATLTKKQLATLSRKHKRKDSQ >Mature_61_residues PKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNTEFGATLTKKQLATLSRKHKRKDSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7182; Mature: 7051
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNTEFGATLTKKQLATLSRKHKRKD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC SQ CC >Mature Secondary Structure PKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNTEFGATLTKKQLATLSRKHKRKD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC SQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA