Click here to switch to the map view.

The map label for this gene is murI [H]

Identifier: 162420811

GI number: 162420811

Start: 127108

End: 127830

Strand: Direct

Name: murI [H]

Synonym: YpAngola_A0124

Alternate gene names: 162420811

Gene position: 127108-127830 (Clockwise)

Preceding gene: 162420666

Following gene: 162421519

Centisome position: 2.82

GC content: 48.13

Gene sequence:

>723_bases
TTGCCGGATCTCCACTATATATATGCTTTTGATAACGTCGCTTTCCCTTATGGGGAAAAGTCCGGCGAATTTATTGTCGA
GCGTGTGCTGGAAATTGTGACCGCGGTACAGCAGCGCCACCCTTTGGCAATTGTTGTCATCGCGTGTAACACGGCTAGCA
CTGTCTCTCTGCCTGCGTTACGTGAACGCTTCGCCTTCCCTGTTGTCGGCGTGGTCCCAGCGATTAAACCGGCAGTAAGG
TTAACGCGTAATGGCGTTGTGGGTTTACTTGCCACTCGTGCAACCGTCCATGCTTCTTATACCTTAGATTTAATTGCGCG
TTTTGCCACTGATTGCAAAATAGAGTTGCTGGGTTCATCTGAGCTGGTGGAGGTAGCAGAAACCAAGTTGCATGGTGGAG
TTGTACCGCTCGAGGTATTAAAGAAGATTCTCCACCCATGGTTAAGCATGCGTGAGCCACCGGATACTATAGTATTGGGT
TGCACCCATTTCCCTCTATTAACAGAAGAGTTAGCGCAAGTGCTACCGGAAGGTACCCGGATGGTCGATTCAGGCGCTGC
CATTGCTCGCCGAACGGCTTGGCTTATCTCTTCTCAAGAGAATGTTATTTCTTCTCAAGATGAAAACATCGCTTACTGCA
TGGCTTTAGACGAGGATACTGACGCTTTATTACCCGTTTTACAGAGTTATGGTTTCCCGAAGCTGCAAAAACTACCAATT
TAA

Upstream 100 bases:

>100_bases
AGCTATAACTTCTAAGGCTGACTCTCCTCCTCGCCCGACAGCACTGATTTTTGATTCGGGTGTTGGCGGGCTGTCTGTCT
ATCAAGAGATTCGGCAACTG

Downstream 100 bases:

>100_bases
GCGCAATTCGTCTAAAGAATCAGCGGTTGAAAAGTTTTTTGAAATTAGGGGTTGCAGGCTGTCAGGAACTCCCTATAATG
CGCCTCCACTGACCGGGAAC

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVR
LTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLG
CTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI

Sequences:

>Translated_240_residues
MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVR
LTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLG
CTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI
>Mature_239_residues
PDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVRL
TRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGC
THFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=240, Percent_Identity=72.5, Blast_Score=346, Evalue=7e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 26283; Mature: 26152

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL
CCCCEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHH
RERFAFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSS
HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCH
ELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTR
HHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCE
MVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI
EECCCHHHHHHHHHEECCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL
CCCEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHH
RERFAFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSS
HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCH
ELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTR
HHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCE
MVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI
EECCCHHHHHHHHHEECCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA