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The map label for this gene is intA [C]

Identifier: 162420316

GI number: 162420316

Start: 1493777

End: 1493953

Strand: Direct

Name: intA [C]

Synonym: YpAngola_A1440

Alternate gene names: 162420316

Gene position: 1493777-1493953 (Clockwise)

Preceding gene: 162419110

Following gene: 162421932

Centisome position: 33.16

GC content: 49.72

Gene sequence:

>177_bases
ATGGCGCGGACTACACGCCCCCTCACCCACACCGAAGTACAAAAAGCAAAAACCACCGACAAAGACCTAACCCTCCATGA
TGGTGATGGTTTATTTCTGTTAGTTGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGG
GTAATCTGCTCTCCTGA

Upstream 100 bases:

>100_bases
TCTGTAGTAGTCCAAGGATATCCGCCTGAAGCCAGAGACAATTGGTATACGCTAAGATAGGTACCAATGGACGTATACCA
ATTACAGGGAAGAACCTTGC

Downstream 100 bases:

>100_bases
TTCAGGAGAGTTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGA
TTGCCAGAGAACTGGGGATC

Product: prophage CP4-57 integrase

Products: NA

Alternate protein names: Prophage Integrase; Integrase Family Protein

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MARTTRPLTHTEVQKAKTTDKDLTLHDGDGLFLLVVTNGAIVIHTQRLKSDPGGNLLS

Sequences:

>Translated_58_residues
MARTTRPLTHTEVQKAKTTDKDLTLHDGDGLFLLVVTNGAIVIHTQRLKSDPGGNLLS
>Mature_57_residues
ARTTRPLTHTEVQKAKTTDKDLTLHDGDGLFLLVVTNGAIVIHTQRLKSDPGGNLLS

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6296; Mature: 6165

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTTRPLTHTEVQKAKTTDKDLTLHDGDGLFLLVVTNGAIVIHTQRLKSDPGGNLLS
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ARTTRPLTHTEVQKAKTTDKDLTLHDGDGLFLLVVTNGAIVIHTQRLKSDPGGNLLS
CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA