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The map label for this gene is yijD [H]

Identifier: 162420303

GI number: 162420303

Start: 123021

End: 123428

Strand: Direct

Name: yijD [H]

Synonym: YpAngola_A0121

Alternate gene names: 162420303

Gene position: 123021-123428 (Clockwise)

Preceding gene: 162421065

Following gene: 162420666

Centisome position: 2.73

GC content: 46.81

Gene sequence:

>408_bases
ATGGAACAATCTTCTCGCCGTGAAACCGGCACCCTACTACTGGCATTAATTACTGGCTTGGCGATAAATGGGGTATGTGC
CGCGTTATTCAGTGCGCTGGTGCCTTTTTCAGTTTTTCCACTACTGACGCTCATACTGGCGGTGTATTGCCTACATCAGC
GTTATCTCAATTTTGCTATGCCGCAAGGGATACCGGTGCTGGCTTCAGCATGTTTCCTGCTTGGGATCTTGTTGTACAGC
GCGATTGTGCGGGTGGAATACCCTGCAATTGGGTCTAACTTCGTTCCTGCGGTGCTCAGTGTGGTGTTGGTGTTCTGGAT
CTTATTTAAATTAAGAACACGTAAATCGGTACAAACACATACAGATGCGGATATTGATATCAATAACTCGGATCAACCAC
AGCAATAG

Upstream 100 bases:

>100_bases
GGTCTTACAGTTACGGATGATCTCCAAAGGTGCTTACTATTGGTATCGCCGTGAACAAGAAAAGCTTGCTGCGTCCCGTG
TAGAATAAGGTAAAGAAAAT

Downstream 100 bases:

>100_bases
CCCTTGGGTCTTCAGCCCTATCAAGCTGTTTTATAGCGCGGTGCTCGAAGGGGTTACTGCACCTAGATACCGTCTTGCCA
ACTAAGGGCAACATGTCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEQSSRRETGTLLLALITGLAINGVCAALFSALVPFSVFPLLTLILAVYCLHQRYLNFAMPQGIPVLASACFLLGILLYS
AIVRVEYPAIGSNFVPAVLSVVLVFWILFKLRTRKSVQTHTDADIDINNSDQPQQ

Sequences:

>Translated_135_residues
MEQSSRRETGTLLLALITGLAINGVCAALFSALVPFSVFPLLTLILAVYCLHQRYLNFAMPQGIPVLASACFLLGILLYS
AIVRVEYPAIGSNFVPAVLSVVLVFWILFKLRTRKSVQTHTDADIDINNSDQPQQ
>Mature_135_residues
MEQSSRRETGTLLLALITGLAINGVCAALFSALVPFSVFPLLTLILAVYCLHQRYLNFAMPQGIPVLASACFLLGILLYS
AIVRVEYPAIGSNFVPAVLSVVLVFWILFKLRTRKSVQTHTDADIDINNSDQPQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790402, Length=115, Percent_Identity=66.9565217391304, Blast_Score=163, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009867
- ProDom:   PD076479 [H]

Pfam domain/function: PF07226 DUF1422 [H]

EC number: NA

Molecular weight: Translated: 14824; Mature: 14824

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSSRRETGTLLLALITGLAINGVCAALFSALVPFSVFPLLTLILAVYCLHQRYLNFAM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PQGIPVLASACFLLGILLYSAIVRVEYPAIGSNFVPAVLSVVLVFWILFKLRTRKSVQTH
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
TDADIDINNSDQPQQ
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQSSRRETGTLLLALITGLAINGVCAALFSALVPFSVFPLLTLILAVYCLHQRYLNFAM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PQGIPVLASACFLLGILLYSAIVRVEYPAIGSNFVPAVLSVVLVFWILFKLRTRKSVQTH
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
TDADIDINNSDQPQQ
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]